Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00559 atggCTTCAACCAGCATCTCAAACATGACAGGTTCTGTTACACATGTACCTATAAAAATGGCACTGGATTTTCATTTTCACACTAGATCACCAAGTTTGTTGAAATATTCTCATAAACCCTCAAGCTTAAAGTGTTTGTGTGCTGCAAAAATGAATAATAGTAACGTGACATCTACAAGGACTATTCTGCATGATCTTTATGAGAAGGAAAGACAAAGTCCTTACTATGATAATCTCTGTCGACCCATTTCAGATTTGGTTCCATTCATTGCCTCTGGAATCAGAGGTGTTACTACCAACCCTGCgATATTTGAAAAAGCTATATCATTATCAAATGCTTACAATCAACAGTTGAGGGAGTTGGTAGAAGGAGGGAAAGACACAGAAAGTGCCTATTGGGAATTGGTTGTGAAGGACATTCATGATACTTGCAAACTCTTGGAACCAATTTACAATGAAACAAATGGTGTAGATGGATATGTATCTGTTGCAGTTTCCCCCAAGCTTGCAAATGATACCAAAGGAACAATTGAGGCAGCAAAATGGCTTCATAAAATGGTTGGATGTCCAAATGTTTACATTAAAATCCCTGCAATTGATGAATCCATTCCTTCAATTAAGGAAGTTATTTCTCTTGGGATAAGTGTGAATGTCACTCTCATATTCTCTCTCGCTAGATATGAAGCTGTAATTAATGCTTACTTGGATGGTCTTGAAGCTTCTAGTATGACTGATCTCTCTAAGGTTTCAAGTGCAGCAGCTTTCTACATCAGTAGAGTGGATGTTATAATTGACAAGAAACTTGAGCAGATTGGTACTGTTGAGGCTCTTGATCTCACAGGAAAGGCTGCGGTTGCTCAAGCAGCCTTGGCTTACCAGCTTTACCAGAAAATGTTTTCTGGTCCAAGATGGGAGCGCCTGGAGAAGAGAGGTGCCAAGAAGCAAAGATTGATGTGGGCCTCAACAAATGTTAAAAATTCAGCTTACCCTGATACTTTATATGTTAATTCTCTTATTGGACCTGATACGATTTCAACCATACCACCAGACCCTGCTCTTAAAGCATTCATGGACCATGGTGTTCTTTCAAGAACCTTGGACGCAAAAGTATCAGAGGCTCAAAGCATTTACAATGCAATTGAGTCATTGGGGATTGATTGGAGTTCTGTTGGATCACAACTTGAAAACGAGGTGCTTACTTCTTTCACAAGAAGCTTCGACAACGTGCTTGGGTGCCTGAGAAAAAAGGTTAATGAATTCGCAAGCCAATAA 1272 0.3931 MASTSISNMTGSVTHVPIKMALDFHFHTRSPSLLKYSHKPSSLKCLCAAKMNNSNVTSTRTILHDLYEKERQSPYYDNLCRPISDLVPFIASGIRGVTTNPAIFEKAISLSNAYNQQLRELVEGGKDTESAYWELVVKDIHDTCKLLEPIYNETNGVDGYVSVAVSPKLANDTKGTIEAAKWLHKMVGCPNVYIKIPAIDESIPSIKEVISLGISVNVTLIFSLARYEAVINAYLDGLEASSMTDLSKVSSAAAFYISRVDVIIDKKLEQIGTVEALDLTGKAAVAQAALAYQLYQKMFSGPRWERLEKRGAKKQRLMWASTNVKNSAYPDTLYVNSLIGPDTISTIPPDPALKAFMDHGVLSRTLDAKVSEAQSIYNAIESLGIDWSSVGSQLENEVLTSFTRSFDNVLGCLRKKVNEFASQ 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00559 423 PANTHER TRANSALDOLASE-RELATED 51 417 - -
Tsu02g00559 423 ProSitePatterns Transaldolase signature 1. 96 104 IPR018225 GO:0005975
Tsu02g00559 423 PANTHER TRANSALDOLASE 51 417 IPR001585 GO:0005975
Tsu02g00559 423 SUPERFAMILY Aldolase 73 417 - -
Tsu02g00559 423 PIRSF Trnald_Bac_Plnt 52 423 IPR004732 GO:0004801|GO:0005737|GO:0006098
Tsu02g00559 423 Pfam Transaldolase/Fructose-6-phosphate aldolase 89 410 IPR001585 GO:0005975
Tsu02g00559 423 CDD Transaldolase_like 73 407 IPR004732 GO:0004801|GO:0005737|GO:0006098
Tsu02g00559 423 Hamap Transaldolase [tal]. 63 423 IPR004732 GO:0004801|GO:0005737|GO:0006098
Tsu02g00559 423 TIGRFAM tal_mycobact: transaldolase 93 410 IPR004732 GO:0004801|GO:0005737|GO:0006098
Tsu02g00559 423 Gene3D Aldolase class I 61 418 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00559 Tsu-Chr2 4734084 4737397 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00559 K00616 - gmx:100811673 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00559 02 4734084 4737397 Tsu02g00559 02 4734084 4737397 ECH