Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00557 ATGGGTATTTGGAAATccaattttttagggtttctttcTGTTGCTTTTCTCTTTACAATTGATGCTGTTCATCTGCACATGAATCAGCCCACTGAAAGAATTTCAGGCAGCGCTGGTGATGTACTGGAAGATGATCCAGTTGGAAGGTTGAAGGTTTTTGTTTATGAGCTTCCAAgtaaatataataagaaaattcTACAAAAGGACCCAAGATGCCTTGCCCATATGTTTGCTGCTGAGATATTTATGCACCGGTTTCTCCTATCAAGCGCTGTCCGAACCCTTAATCCCGAAGAAGCTGATTGGTTTTATACGCCTGTCTACACAACCTGTGACTTGACACCAAATGGCCTCCCTTTACCCTTCAAATCACCGCGAATGATGAGGAGTGCCATACAGCTTATTTCTTCTAACTGGCCCTATTGGAATCGAACAGAGGGGGCAGATCATTTCTTTGTGGTTCCTCATGACTTTGGGGCATGTTTTCATTACCAAGAAGAGAAGGCAATTGAAAGAGGGATTCTTCCACTTCTGCAGCGCGCTACCTTGGTTCAAACATTTGGACAGAGAAATCATGTGTGCTTGAAAGAGGGCTCAATTACCATTCCTCCATATGCTCCACCACAAAAAATGCATACCCACTTGATTCCTGATAAGACTCCCAGGTCCATTTTTGTATACTTCCGAGGACTGTTTTATGATGTAGGAAATGACCCTGAAGGTGGATACTATGCAAGAGGTGCAAGAGCAGCAGTATGGGAGAACTTTAAGAACAATCCATTATTTGACATTTCCACAGAGCATCCTACCACATATTACGAGGACATGCAACGAGCTGTGTTTTGCCTATGCCCACTTGGATGGGCCCCTTGGAGCCCAAGATTGGTTGAAGCTGTGGTATTTGGTTGCATCCCTGTTATTATTGCAGATGATATTGTTCTTCCGTTTGCCGATGCAATTCCGTGGGAAGAGATCGGGGTGTTTGTTGATGAGCAGGATGTTCCTAAGTTGGATACCATACTCACATCGATACCTCCAGAAGTTATACTAAGGAAACAGAGATTGCTTGCTAATCCTTCCATGAAGCAGGCAATGTTGTTCCCTCAACCTGCACAAGCTGGAGACGCTTTCCATCAAGTTTTAAATGGACTTGCACGGAAGTTGCCGCATGAAAGGAGTGTATTCTTGAAACCAGGGGAGAAGAGCTTGAATTGGACTGCTGGCCCTGTGGGTGACCTTAAACCTTGGTAA 1251 0.4317 MGIWKSNFLGFLSVAFLFTIDAVHLHMNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLAHMFAAEIFMHRFLLSSAVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILPLLQRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKNNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVDEQDVPKLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPAQAGDAFHQVLNGLARKLPHERSVFLKPGEKSLNWTAGPVGDLKPW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00557 416 PANTHER IRX10L-LIKE PROTEIN, PUTATIVE-RELATED 6 410 - -
Tsu02g00557 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 6 410 IPR004263 GO:0006486|GO:0016757
Tsu02g00557 416 Pfam Exostosin family 49 344 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00557 Tsu-Chr2 4723703 4726526 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00557 K20870 - gmx:100797122 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00557 02 4723703 4726526 Tsu02g00557 02 4723703 4726526 ECH