Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00550 ATGGCGTTCTCATCATCGTCCTTATGGTCTTCTCTCTTCATTCCAAATCCCAACAAAACCAACCGTTTCTCTACATTCTCTCCCGCCAATCACAAACTCTCAACAACCACATTCGCCATCCCTCCACTCTCAACCGCAACTGCCGCCGACGTTTCCGGCGCAATTGACGGCACAACAATCGCTGTACTAAGTGGCGGCTTTGTTGCCGGTCTCACTGCGCTTGTCTCTCTTACGGACCCCGAGAGACGGAGGCGCGAACAGGCGGAGGAAGTTGGCGGGGATGATAAAGAAGTTGTGAAGGAGTATTTTAACAATAATGGTTTTCAACGGTGGAAGAAAATCTACGGTGATACTGATGACGTTAATAGAGTTCAACGGGATATTAGGTTGGGGCATTCCAAGACTGTGGAAAATGCTATACAGATGCTTAAAGAAGAAGGATCACTTCAGGGTGTTACTATTTGTGACGCTGGTTGTGGAACTGGTTCTCTCTCAATTCCGTTAGCTAAGGAAGGTGCTGTTGTTTGTGCCAGTGATATATCAGCTGCCATGGTCTCAGAAGCTGAGAAACAGGCGAAAGAACAACTTGGGTCATCTGCACTGCCAAAGTTTGTGGTGAGCGATTTAGAAAGTTTGGATGGATTGTACGATACAGTGGTGTGCCTCGATGTTATGATTCATTACCCTCAGAGTAAAGCGGATGGGATGATTGCTCACCTTGCTTCTTTGGCAGAAAAGCGATTGATTCTGAGCTTTGCACCTAAGACATTTTACTATGATGCACTGAAGAGGGTTGGAGAGTTATTCCCTGGGCCTTCCAAGGCAACCAGAGCATATCTTCATTCCgaagcagatgttgaaagaGCGTTACGCAAGGTTGGGTGGACGATAAAGAAGAGAGGCTTAATTGCTACTCAATTTTACTTTGCCAAGCTTATTGAGGCTGTTCCTATGTAG 957 0.4556 MAFSSSSLWSSLFIPNPNKTNRFSTFSPANHKLSTTTFAIPPLSTATAADVSGAIDGTTIAVLSGGFVAGLTALVSLTDPERRRREQAEEVGGDDKEVVKEYFNNNGFQRWKKIYGDTDDVNRVQRDIRLGHSKTVENAIQMLKEEGSLQGVTICDAGCGTGSLSIPLAKEGAVVCASDISAAMVSEAEKQAKEQLGSSALPKFVVSDLESLDGLYDTVVCLDVMIHYPQSKADGMIAHLASLAEKRLILSFAPKTFYYDALKRVGELFPGPSKATRAYLHSEADVERALRKVGWTIKKRGLIATQFYFAKLIEAVPM 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00550 318 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 89 300 IPR029063 -
Tsu02g00550 318 CDD AdoMet_MTases 153 252 - -
Tsu02g00550 318 ProSiteProfiles Magnesium protoporphyrin IX methyltransferase (EC 2.1.1.11) family profile. 1 317 IPR010251 GO:0015995|GO:0046406
Tsu02g00550 318 PANTHER METHYLTRANSFERASE 60 315 - -
Tsu02g00550 318 Pfam Magnesium-protoporphyrin IX methyltransferase C-terminus 221 316 IPR010940 GO:0015995|GO:0046406
Tsu02g00550 318 Gene3D Vaccinia Virus protein VP39 90 318 IPR029063 -
Tsu02g00550 318 PANTHER MAGNESIUM PROTOPORPHYRIN IX METHYLTRANSFERASE, CHLOROPLASTIC-RELATED 60 315 - -
Tsu02g00550 318 TIGRFAM BchM-ChlM: magnesium protoporphyrin O-methyltransferase 95 314 IPR010251 GO:0015995|GO:0046406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00550 K03428 - gmx:100817017 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00550 02 4658205 4660145 Tsu02g00550 02 4658205 4660145 ECH