Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00525 ATGTATGCATGGGTTCTCTCATGTGTTCTTTCATTGTATTGTTGTACTTTTTCCCAAAATATAGGCAAAACAGTCCAGCCAAAGTCAGCAAATGAAGTGAAATTGATTAGTTCTGGTAAAATCTTGGAAAACAACAAGACTGTTGGTCAATGTAAAGCACCGTTTGGCGATATTGCGGGGGGAGTTATTATCATGCACGTTGTTGTACAGCCATCTCTAGCAAAATCTAAAGCTGAAAAGAAGATTGATGATTCACCAAAGAAGGTTGTATGTTCTTGTTCTATACTATGA 291 0.3711 MYAWVLSCVLSLYCCTFSQNIGKTVQPKSANEVKLISSGKILENNKTVGQCKAPFGDIAGGVIIMHVVVQPSLAKSKAEKKIDDSPKKVVCSCSIL 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00525 96 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 22 96 IPR040015 -
Tsu02g00525 96 SUPERFAMILY Ubiquitin-like 22 75 IPR029071 -
Tsu02g00525 96 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3 22 96 - -
Tsu02g00525 96 Pfam Ubiquitin-2 like Rad60 SUMO-like 23 94 IPR039540 -
Tsu02g00525 96 Gene3D - 10 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00525 Tsu-Chr2 4425238 4428467 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00525 - - gmx:100810070 138.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00525 02 4425238 4428467 Tsu02g00525 02 4425238 4428467 ECH