Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00524 ATGGATGTTCAcgtcaaagaagaagaaaccttCGACATTCCAACTGAACCGGGAAGAAAGAACCGAAGAAACTCCGGTTCACATCCTCCTCCTCCACCTGACTCGGTTATTGACCTCAGTAGCAGTAGTAGTAGCAGCGATTCCGATTCCGATGGTGATTTAGAATCTGTTGTTGCTAGTGTTGTTAACGCGGTTGAAAGTCCTTCCAAGAAAAGAAAGGTTAATGATAAAGGAGCGATTCTACCGGCTGGATTTCTAAGTCCGCTACCTCCACCGTCGCCGTCACCGTCACACAATGCTGTTCTTTCTTTACCGGCACCGGACTGGGCTTCTTCCGCTAACCGAAGTAATAGGAGTGTTAGCTTTGCACTTAAGGGATGTAAGCAGTTTTGGAAAGCCGGTGATTACGATGGTGCTCCGAGTGGTGGTTTTGAATCTTCAACCGTTGGTATGGATCATGTCAGGGTTCACCCCAAGTTTCTACACTCTAATGCCACAAGTCATAAGTGGGCTCTTGGAGCTTTTGCTGAGCTTTTGGACAATGCATTGGATGAGGTTTGTAATGGTGCCACATATGTAAATGTAGATATGGCTGTGAGTAAGAAAGATAACTCCAAGATGTTGCTAATAGAAGATAACGGTGGTGGGATGAATCCTGATAAAATACGTCAATGCATGTCGCTGGGATATTCCGAGAAAAGCAAGCTGGCAAATACAATCGGACAATATGGAAATGGATTTAAAACAAGTACCATGAGGCTTGGGGCTGATGTAATTGTGTTCTCCCGATGTAAAGGAAAAGAAGGGAAgagGTCTACACAGAGCATAGGCTTGCTGTCTTATACATTTTTGAAGAATACTGGGAAGGAAGACATTGTAGTGCCCATGCTGGACTACGAAAGAGATGGACAGGGATGGAAAAGGATTTTACGAACTTCTCTGGATGATTGGAATAATAATGTTGAGACGATAGTTCAGTGGTCACCATTTTCTGATGAGGCCGATCTGCTTCGTCAGTTCAACCTCTTGAAAGATCAAGGTACGCGGGTAATTATATACAATCTCTGGGAGGATGACCAAGGTCAGCTGGAACTCAATTTTGATGACGATCCACATGATATTCAAATAAGAGGTGTAAATCGTGATGAGAAAAACATTCAGATGGCTAAAAGTTATCCCAACTCTACACACTTCTTAACTTATCGACATTCGCTGAGGAGTTATGCTTCAATTTTATATCTAAGGTTTCCTCGAGGCTTCCGAATTATTCTTCGTGGGAAAGATGTTTTGCATCACAATATAGTCAATGATATGATGATGTCTCAGGAGGTCACATACAGGCCTCAATCTGGAGTTGCTGATGGGATTTTAAAGGATTCAAATATGGTTGCTACTGTTACTATCGGATTTGTCAAGGATGCAAAACATCATATTGATGTTTCAGGGTTTAATGTTTATCATAAGAATCGTCTCATCAAGCCATTCTGGAGGATCTGGAATCCAGCAGGAAGTGGTGGGCGTGGGGTCATAGGCGTATTGGAAGCCAACTTTGTTGAACCTGCTCATGACAAGCAGGGCTTTGAACGTACATTAGTTTTATCAAGACTGGAGCAACGGCTGATACAAATGCAGAAAACTTACTGGGGAACTAATTGCCATAAAATTGGCTATACTTCACATCGAAAACAAAACGGCAGTTCTGCTGATAAAGAGACATCTCCCGATGCTGTTCCAGAATCATCTCGACCTAAAAGGAAATCTTTGGCCACAAATGGAAAGGCAACACCATTTGCAACAGACGAACAGTATTCACACTCAAAACAGAAACGTATACGGACAGAATCCAAAAGATATAGTGAACACAGAAATGGTCGCTCCTCTGTTTCCCCTGGGAGTAGGAATCAAAGTTCATCGGAGGAATCATCATATGCTGCTGACGACAGTGATCAAAATGATAATGTCTCATCAAAGAACCAAACAAAGGGTCTACACAAGGATCTAACACCAAGGGGAAACGCCATGCGGCCTACACAAGGATCTAACCAAAAGGGAAAAGGTATTAATGATCATGAGGAACCACAATATGATTTATCATCTCTAGAACAGTTGAGAAAAGAGAATCGTGAATTGAAGGAGAGATTAGAGAAGAGAGAGGAAGAAATATTAAGTGAAGTATCACAAGCTTTACAAGAGGAGAAAGATAAGTGCAAATCTCTTGAAACTCGGCTCCGTGATGCCGAACAAAAGATTGAAGACTTGAATAGGGAACAAGAAACTCTTATTGACGTGTTCTCTGAAGAGAGGGATAGACGTAATgttgatgaaaaaaatttgagaaataaGCTTCAGGAAGCATCAAATACCATCCAAGAGCTGCTTGACAAGGTTCGATCACTCGAAAGGAAGTCTTCAAGTCAAGCTGCAAAGTAG 2430 0.414 MDVHVKEEETFDIPTEPGRKNRRNSGSHPPPPPDSVIDLSSSSSSSDSDSDGDLESVVASVVNAVESPSKKRKVNDKGAILPAGFLSPLPPPSPSPSHNAVLSLPAPDWASSANRSNRSVSFALKGCKQFWKAGDYDGAPSGGFESSTVGMDHVRVHPKFLHSNATSHKWALGAFAELLDNALDEVCNGATYVNVDMAVSKKDNSKMLLIEDNGGGMNPDKIRQCMSLGYSEKSKLANTIGQYGNGFKTSTMRLGADVIVFSRCKGKEGKRSTQSIGLLSYTFLKNTGKEDIVVPMLDYERDGQGWKRILRTSLDDWNNNVETIVQWSPFSDEADLLRQFNLLKDQGTRVIIYNLWEDDQGQLELNFDDDPHDIQIRGVNRDEKNIQMAKSYPNSTHFLTYRHSLRSYASILYLRFPRGFRIILRGKDVLHHNIVNDMMMSQEVTYRPQSGVADGILKDSNMVATVTIGFVKDAKHHIDVSGFNVYHKNRLIKPFWRIWNPAGSGGRGVIGVLEANFVEPAHDKQGFERTLVLSRLEQRLIQMQKTYWGTNCHKIGYTSHRKQNGSSADKETSPDAVPESSRPKRKSLATNGKATPFATDEQYSHSKQKRIRTESKRYSEHRNGRSSVSPGSRNQSSSEESSYAADDSDQNDNVSSKNQTKGLHKDLTPRGNAMRPTQGSNQKGKGINDHEEPQYDLSSLEQLRKENRELKERLEKREEEILSEVSQALQEEKDKCKSLETRLRDAEQKIEDLNREQETLIDVFSEERDRRNVDEKNLRNKLQEASNTIQELLDKVRSLERKSSSQAAK 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00524 809 Gene3D - 158 353 IPR036890 -
Tsu02g00524 809 Coils Coil 775 809 - -
Tsu02g00524 809 PANTHER PROTEIN MICRORCHIDIA 7 1 795 - -
Tsu02g00524 809 MobiDBLite consensus disorder prediction 1 75 - -
Tsu02g00524 809 Pfam Morc6 ribosomal protein S5 domain 2-like 403 548 IPR041006 -
Tsu02g00524 809 MobiDBLite consensus disorder prediction 603 623 - -
Tsu02g00524 809 MobiDBLite consensus disorder prediction 1 23 - -
Tsu02g00524 809 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 1 795 IPR045261 GO:0016887
Tsu02g00524 809 MobiDBLite consensus disorder prediction 624 662 - -
Tsu02g00524 809 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 173 275 - -
Tsu02g00524 809 MobiDBLite consensus disorder prediction 584 602 - -
Tsu02g00524 809 MobiDBLite consensus disorder prediction 559 574 - -
Tsu02g00524 809 Coils Coil 697 763 - -
Tsu02g00524 809 MobiDBLite consensus disorder prediction 685 701 - -
Tsu02g00524 809 MobiDBLite consensus disorder prediction 37 53 - -
Tsu02g00524 809 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 173 374 IPR036890 -
Tsu02g00524 809 MobiDBLite consensus disorder prediction 559 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00524 Tsu-Chr2 4400631 4410592 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00524 - - gmx:100816702 1049.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00524 02 4400631 4410592 Tsu02g00524 02 4400631 4410592 ECH