Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00518 atgcacattCGCCGTCTCAGGCTCGACGACGACAACGACGACGAAGAAGATGCCGCCGGTGAAACAGTTCAGCCGCAGCCACCACCTCAAACAATCACACATCAAACTGAAAACTCCACCAATTTTCCCTCACTGCCCGTCGAAATCTCCGACGATGACTTTATAGACATCTCCGATGACCTGATTACTCCTCCACCTATTCCCGAACCTCAGGCTTCCGATTGTCCTGTTAACGATTTTCTTCGCGGACTTGGATTTGGTTTGAAGAGAGACTCGCTTGCTACTTGTCTTCGCGAATTAGGGGATTCGGTGAATGGATTCCAAGGGTTTGATGTTGCTACAAAAGctaaactctgttttgaacaGTTTCTGTTTTCCGATCTCAATTTTCATGGCTCCGGCGTTCTTCCTCCTAATGTTGAGTCAATGCATCTCGATGTTCTCCCTGGTCCCTACGTATTGCAGGTTGATGAAATTCTCAATATCACTTGTCCTCTACGAAGCAGATATCAAGAAGCTCCTCCAGGGCTTAAAAGGTGCTTGAAGTTGTCAATGACTGATGGTATTCAGAGAGTCTTTGGAATGGAGTACAGGCCTATTAAAGCTCTTGAAGTTTGTGCGGCTTCTGGTTTAAAGGTCGCAATCATGAATGTACAAGTGCGCCGTGGACTTTTGATGCTGGTTCCTGAAACCATTGAAATATTGGGGGGATTAGTTGAGCGGCTGGATGCAGCTCGAAAGAGGCTGGTTGATGAACTAAATAAGCCAGCAAGGGGAAACAGAACCAGAAATGGAGTGCTTCCTCCGTTAGCAACCCGAGCGACTCTTGCTGCATGGCCTCCAAGTAGAGTTGATGATCTCAGTCACAGTGGCTCAACGTTGCCCAGTATTGATACTGTCCAGGCAAACAACCAAGGTACCGGCCACAGCATTCCTGGCACTGGTAATAACTTAACAACTGAATATACTTTGCGCATGGGTGCACAAAATGCTACTTCCAATTCAATACCCCGCATGGTTTCAAATGTGGACCGAACGAATATTGACACGCGGCGCCAGCAGGGTGCCAGTGTAACAACTGAAATAACAACTGAAGATGCTTCGCCCATGGATGCACAAATTGCTACTTCGAATTCAATACCTCACATGGTTTCAAATGTGGAGCCAATGAATATTGATATGCAGCGGGGTACCATTCCTGTTTCCCATAATAGTTCAACAGGTAACCGGACTTCTTCAATAGCTGAGGAGATGCATATAGATACTGCTAATATTACCAGGGATTGCAACCGGTCTTCTCCCATGAACTCAAATGTTGCAACGACCCATGAAGACACCATTCATATAACAAGAGAAAGTTCTGTGACTATTGACTGCTCTCCCGTTTCTGTAAAAGTCGAGACAGACAGGGACAGAGTTCCTGTAGTCACAGATAATACTCCTCTGAATGGATCCTCTTCCACTGTTTTTAACAATGAAGATATCCTGATGGATGATGCCAGTGACAATCCGCTCATACTGTCTGGAGACCGAGAAGTTCCTTTCACATACTTAGCTAGTTTGTCCGCCAAGTGGGCTGCAATGAAGGAGACAGATCTCCTGGTTCGGGGTAAAATTAAGtgcTTTCTAACCGGTGTAAAAGGATTCCAGTTTAAGAAAAGAACAACCTACGAGCTTCAGGCATATGTAGATGACGGCAGTCTTATTTCCGAAATCCTTATTGATcatgatgtTGTACAGAAAGGAATTGGTTATTCTCCTGTCGAGGTCACTGCGGCTCTTTCTTCTTCTGACACGAATATAGCCCAGAACATGAAGGAGACTATGCACAAATTCCAAGCTTTCTTAGCAAACTTTGAGgGAGTAATACTTGTGgaattaaatagaaaatattcCCTTCCACTTGTTCTAGACATGAGTCAAGGCTGTCCTAAATCTGATGCGTGGTCCCTTCTGAGAAGGTTGAAGTCTCATCACCCTGCACAAGCTCAAAAGCATTTCCCTTCAGACACCATTGTTTTATCCCCATAA 2031 0.4407 MHIRRLRLDDDNDDEEDAAGETVQPQPPPQTITHQTENSTNFPSLPVEISDDDFIDISDDLITPPPIPEPQASDCPVNDFLRGLGFGLKRDSLATCLRELGDSVNGFQGFDVATKAKLCFEQFLFSDLNFHGSGVLPPNVESMHLDVLPGPYVLQVDEILNITCPLRSRYQEAPPGLKRCLKLSMTDGIQRVFGMEYRPIKALEVCAASGLKVAIMNVQVRRGLLMLVPETIEILGGLVERLDAARKRLVDELNKPARGNRTRNGVLPPLATRATLAAWPPSRVDDLSHSGSTLPSIDTVQANNQGTGHSIPGTGNNLTTEYTLRMGAQNATSNSIPRMVSNVDRTNIDTRRQQGASVTTEITTEDASPMDAQIATSNSIPHMVSNVEPMNIDMQRGTIPVSHNSSTGNRTSSIAEEMHIDTANITRDCNRSSPMNSNVATTHEDTIHITRESSVTIDCSPVSVKVETDRDRVPVVTDNTPLNGSSSTVFNNEDILMDDASDNPLILSGDREVPFTYLASLSAKWAAMKETDLLVRGKIKCFLTGVKGFQFKKRTTYELQAYVDDGSLISEILIDHDVVQKGIGYSPVEVTAALSSSDTNIAQNMKETMHKFQAFLANFEGVILVELNRKYSLPLVLDMSQGCPKSDAWSLLRRLKSHHPAQAQKHFPSDTIVLSP 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00518 676 SMART DUF1767_2 78 171 IPR033472 -
Tsu02g00518 676 Pfam RecQ mediated genome instability protein 89 248 IPR013894 -
Tsu02g00518 676 Gene3D - 127 253 IPR042470 -
Tsu02g00518 676 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 72 661 - -
Tsu02g00518 676 MobiDBLite consensus disorder prediction 1 44 - -
Tsu02g00518 676 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 514 655 IPR032199 GO:0000166
Tsu02g00518 676 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 72 661 - -
Tsu02g00518 676 MobiDBLite consensus disorder prediction 24 44 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00518 K10990 - gmx:100803734 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00518 02 4335398 4339372 Tsu02g00518 02 4335398 4339372 ECH