Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00493 ATGAAAATGGGAAAACCGAAAGGGAAAAAATCtgaaggaacaaaaaaaaagatcgACAGTGCCATAAAATGCAATTCTAAACAACAGACTGCAGAGAATGCTAATGAACGTCCTGAATGGTTGCCTGATGGCTGGAATGTGGAATTCAGAACCCGAAAAAGTGGTCCGGCTAAGGGAACTGGATATAAGTGTTACATTGATCCATCGAATACATACAAATTCTACTCCAAACCCGAAGTATTTCGACATCTTGAAACTACAAAGCACAGCAACCGCTCTTCCAAGAAGACAAAAGGCACTGGCAAGCATCCTCCAAGCAAGGAGGAGGAGAAATGCTCCAGCAAGCATTATCCAAGCAAGGGGGAGGAGAAGCGCACTAACAGTAACCGACATTCTTCAAGCAAGGAGGAAGAGAAATGCATTGACATGCATTCTCCAAGCAAGGGTGAAGAGAACTACATCAACACGCAGTCTGTAAGCAAGGACGGAGAGAAATGCACTAACACACATTCTCCAAGCAATGTTACGGTTGAAAATTCCACTGTGGAGGATCTACCACCTGGATGGATTAAAGAAGTAAAGATTCGGAAACACAGAAGTGGCATAAAGAAAGATTGGTTTTATATTGATCCAGTGAGTGGATATGTATTCCATTCCAAGAAAGATGTAACACGTTATCTCGAATCTGGAGATATAAGCAGATGTGCCATGAAACCAAGTAGAAGACAACATCAAGATGATGACAACTTAACTCCATCACCTGCTGCCAAGAGACAGAAACCAAAGCAGCCTACTACACCCATGCAAAAGAATTTTGTGCAAAAGAATTTTGTTGCCGAAGAACTAGTTAAAAGCTTAGAATTGCCGGATGTTAACAACTCAAGGAAAGGGCAAGATGTGAATGTGCCATCTGGAACAATGGTTTCTCCTCATACTTCAGGTGAATCCTTGAAAGCGAGTCATCGGTTTTCACGGAGACTAGCTGGGGTTGAACCTGTCAAATTGGCTGACAATGTGACTAATGATCAGACTCTTCTAGTTCCAAAAAGAAATCTGAGAAAAAACCGAACCACTCTAGCCGCTGATATGGAAAATAAAGCACCTCAGCATTTCAATGGTGTCCCAGAAATTGAGCAACCAAAGGCAACAGACACAGGCAACAGACTTTCTGAAGTAGTTTTCAAAGAACAAGCACGTCAGCTAGGAAGAgataaaatagaagaaaataagCCAGAATTTCCTACCAACTCAAACAAATCCAGTAAGAAGAAAGAGCCCCGCATTCCTTGTCGGGCGTCAAAACGACTGGCGGGATGTGAACCTGGGCTGTTGAACTCCATATCGTGtgaaaaaacttcaaaaaataaaagcaaaatgtCCAAGGAAGTCATAGCTGAATTGCAGAAAAGTGAGGGTGCGCAAATTACCGACCTTACAGATCACGCAGCATTAAATGGAGAGTCAggaaataaaagaataaaatctCCTAAAATCCTACCTGCTGCAGACAATCAACCAGAAAAACTTGAAGTGGATGACGAGAAATCAGAACCTCAGCTGTCCTTTGCATTCCACTACTCTTGGTCCGACCCATGTTTGGATTATGCAATCAATACCCTCACGGGTGTGTTACCGTCGGTTGAGAATTCTGTTGATAATGGACCCTCTACAGTCCCTGAAACTGATATACAAAAACCTGCATTTGACACTGTCACCGGAAGAAGCAGGGGCTGTCAAAAAAATTCAGTTGATAATGGACCTGCTACCGTCCATGAAACTGATATTCAAAAAACATTGTTTGACAACGTTACCAGAAGAAGCAATTTGCTTGACAATGTTTTAAGCAGGGACAAAAACCCACCGGTGCCATCAAATAAatccaagagaaagaaagaggtcAAAGTCCCTATGCGGTTGTCGAAGCGACTTGCAGGCGTTGAACCGGAGGCAAGTCCTTCTGATAAAGCTCTTGAATATTCCAGTAGAAAACCATGCAAAGCAAAACCCACTGCAAATGTACTTTTAACTAATGGAACATCTGACCATCTCTGTGGTGGTGAAGAAACCAAGCTTTTGAAAACAGAGGTGCTAAGAGAATCATCAAGAAAAAGTGGTAAGCGACTTGCTGGCATTGAAATGGAGGCAAGTCCTTCTGATAAAGCTCTTGAATATTGCAGTAGAAAAAAACCATTCAAAGAAAACCCCACTGCAAATGTACTTTTAACTAATGGAACATCTGACCATCTCTATGGTGGTGAAGAAACCAAGCTTTTGAAAACAGAAGTGCGAAGAGAATCATCAAGCAAAAGTGATAAGTTATATGATGCTCAAATTATtcagaaagaaaaacaattggAGAAAGTTGAAGCTAAAAATATTAGTGATGGTAGATCAAAGTCAGAGCTGACATCGCCATTTGGTGAATCTTGGTCAGACCCATGCCTAGAATTTGCTTTCAAGACTCTCACGGGTGCTTTGCCGGTTGATTCTGCTGCAGAGATTTTTAAAGTAACGACTCCTGGTGTTGATAACCCGCCAAATAATGAGTTTTATGGGAGAGTGACAACCAACATGAATGGAAAAACTCATGACAACTCAAATCATTCCCAGGACATGAAAGAGTGTAATATGGATGGCCAGACTTCAAAGCTACTGCTTGGGCAACCTGAGTTGAGGACTAGCCCCACATCTGGAAAAAATGTGCCTGAATTTACCAATGGAGAATCTCATAGTCATGAAGACAACATAATAAGGAATTTGGAACCTGTGTTGAGGACTAGCTCCATATCTGGCAAAGATGTGCCTAATTTTACCACCGGAGAATCTCATAGTCATGACAGCGACGACATATTTAGGAATTTGTTTGGAGAACCTCTATATGTTGAAGCTGAAGACACAACCCAACCTCTGCATGATTCTAGAACTAATGCATACTCACAAATACATGAAGAGCCATTAAAGAAAAATGACCAAGTTGCTGAGGGCGAATTATGTACATCGGTGCAACCACCACCATTTCAAACTGAAACGTTAAACCTCGAAAATACTGAATTACAGTTCTGTGAGTCTTTTATGAATTCTTGGTCAGACCCATGCCTAGAATTTGCATTTAAGACTCTTACAGGTGCGATTCCAGTAGAAGACAATTTAGCAATTCAAGGGGGTATCCAGGAACCTGCTAACTGTCATGATAGAAGGGATGATGTATCAGCGTTGCCAGATTTTGGATCGTCCAATTTTTCACAAAGTGATTTCTCATTTCACTTTGATACAGGAGTGAAGTCCACGCCAGGGCAGCAGTCATCAACGAGCTCTTCATTCCCATCTCTGGGCCTGCAAGGTTATCCCGGAGTTGATCCACAACAACAATATTCCCAGttcaataataattttcaaAGAAGGTAA 3405 0.4023 MKMGKPKGKKSEGTKKKIDSAIKCNSKQQTAENANERPEWLPDGWNVEFRTRKSGPAKGTGYKCYIDPSNTYKFYSKPEVFRHLETTKHSNRSSKKTKGTGKHPPSKEEEKCSSKHYPSKGEEKRTNSNRHSSSKEEEKCIDMHSPSKGEENYINTQSVSKDGEKCTNTHSPSNVTVENSTVEDLPPGWIKEVKIRKHRSGIKKDWFYIDPVSGYVFHSKKDVTRYLESGDISRCAMKPSRRQHQDDDNLTPSPAAKRQKPKQPTTPMQKNFVQKNFVAEELVKSLELPDVNNSRKGQDVNVPSGTMVSPHTSGESLKASHRFSRRLAGVEPVKLADNVTNDQTLLVPKRNLRKNRTTLAADMENKAPQHFNGVPEIEQPKATDTGNRLSEVVFKEQARQLGRDKIEENKPEFPTNSNKSSKKKEPRIPCRASKRLAGCEPGLLNSISCEKTSKNKSKMSKEVIAELQKSEGAQITDLTDHAALNGESGNKRIKSPKILPAADNQPEKLEVDDEKSEPQLSFAFHYSWSDPCLDYAINTLTGVLPSVENSVDNGPSTVPETDIQKPAFDTVTGRSRGCQKNSVDNGPATVHETDIQKTLFDNVTRRSNLLDNVLSRDKNPPVPSNKSKRKKEVKVPMRLSKRLAGVEPEASPSDKALEYSSRKPCKAKPTANVLLTNGTSDHLCGGEETKLLKTEVLRESSRKSGKRLAGIEMEASPSDKALEYCSRKKPFKENPTANVLLTNGTSDHLYGGEETKLLKTEVRRESSSKSDKLYDAQIIQKEKQLEKVEAKNISDGRSKSELTSPFGESWSDPCLEFAFKTLTGALPVDSAAEIFKVTTPGVDNPPNNEFYGRVTTNMNGKTHDNSNHSQDMKECNMDGQTSKLLLGQPELRTSPTSGKNVPEFTNGESHSHEDNIIRNLEPVLRTSSISGKDVPNFTTGESHSHDSDDIFRNLFGEPLYVEAEDTTQPLHDSRTNAYSQIHEEPLKKNDQVAEGELCTSVQPPPFQTETLNLENTELQFCESFMNSWSDPCLEFAFKTLTGAIPVEDNLAIQGGIQEPANCHDRRDDVSALPDFGSSNFSQSDFSFHFDTGVKSTPGQQSSTSSSFPSLGLQGYPGVDPQQQYSQFNNNFQRR 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 292 317 - -
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 1 62 - -
Tsu02g00493 1134 PANTHER OS04G0193200 PROTEIN 608 691 IPR038945 -
Tsu02g00493 1134 PANTHER OS04G0193200 PROTEIN 4 563 IPR038945 -
Tsu02g00493 1134 PANTHER OS04G0193200 PROTEIN 701 1126 IPR038945 -
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 83 180 - -
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 890 913 - -
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 234 272 - -
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 254 272 - -
Tsu02g00493 1134 Pfam Methyl-CpG binding domain 185 231 IPR001739 GO:0003677
Tsu02g00493 1134 Pfam Methyl-CpG binding domain 33 89 IPR001739 GO:0003677
Tsu02g00493 1134 PANTHER OS04G0193200 PROTEIN 608 691 - -
Tsu02g00493 1134 PANTHER OS04G0193200 PROTEIN 4 563 - -
Tsu02g00493 1134 PANTHER OS04G0193200 PROTEIN 701 1126 - -
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 643 662 - -
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 1 22 - -
Tsu02g00493 1134 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 175 242 IPR001739 GO:0003677
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 235 253 - -
Tsu02g00493 1134 SUPERFAMILY DNA-binding domain 183 236 IPR016177 GO:0003677
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 571 590 - -
Tsu02g00493 1134 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 31 104 IPR001739 GO:0003677
Tsu02g00493 1134 CDD MBD 185 233 - -
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 610 635 - -
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 483 507 - -
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 890 905 - -
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 400 430 - -
Tsu02g00493 1134 Gene3D - 20 116 - -
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 1091 1134 - -
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 101 146 - -
Tsu02g00493 1134 SUPERFAMILY DNA-binding domain 31 91 IPR016177 GO:0003677
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 574 590 - -
Tsu02g00493 1134 MobiDBLite consensus disorder prediction 149 180 - -
Tsu02g00493 1134 Gene3D - 151 276 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00493 - - mtr:MTR_8g096930 1129.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00493 02 4102631 4109859 Tsu02g00493 02 4102631 4109859 ECH