Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00480 atgacaaaGGTTTATCCTAATCAAGAATCCACAACATCCTCTCAGTCTCACAATCAGTGTCTTAGCTCCAAAAAAGAAACATATACTTTATGGATGAAATCACTTCTTCTTCATTCTAATGGTTGCACTGTCTATAATTCAAATGGTGACATTGTTTATAGAGTTGATAACTATGACAGAAAAGGTAGAAGAGAAGTTAATCTGATGAATCTACAAGGCAATCTTCTTTGCACCATCAAAAAGAGATTACTAGCTCTTGGATGTTGGGAAGGACACAAATATTGCAACAATTCTAATTTTAGAAGCCAAGAACAACAACCATGGTTTGAAGTTAAAAAATGTCTCACTCTCACAGGAAAAATAGCTTGCGAGATTAAAGCAGGGTCCCAAAATTTGTGCATAGAAAGAATGAGTATCGGAAAATCACTTGCTTTTCGGATAGTAAACAAATTAGATGGACAAATCATTGCAGAGGCAAAGCGAAAACAATCATCATCAGGAGTTGTTTTGAGTAATGATGTTCTAACTTTGAATTTGGCAGCTGGGACAGATCATTCCTTAATAATGGCTATGATTATGGTCTACGGATTAATATGCGGCTTAATGTAG 609 0.3498 MTKVYPNQESTTSSQSHNQCLSSKKETYTLWMKSLLLHSNGCTVYNSNGDIVYRVDNYDRKGRREVNLMNLQGNLLCTIKKRLLALGCWEGHKYCNNSNFRSQEQQPWFEVKKCLTLTGKIACEIKAGSQNLCIERMSIGKSLAFRIVNKLDGQIIAEAKRKQSSSGVVLSNDVLTLNLAAGTDHSLIMAMIMVYGLICGLM 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00480 202 Gene3D - 17 201 IPR038595 -
Tsu02g00480 202 Pfam LURP-one-related 17 194 IPR007612 -
Tsu02g00480 202 PANTHER - 2 199 IPR007612 -
Tsu02g00480 202 SUPERFAMILY Tubby C-terminal domain-like 18 199 IPR025659 -
Tsu02g00480 202 PANTHER PROTEIN LURP-ONE-RELATED 4 2 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00480 Tsu-Chr2 3996905 3997513 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00480 - - pvu:PHAVU_002G287800g 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00480 02 3996905 3997513 Tsu02g00480 02 3996905 3997513 ECH