Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00477 ATGGAAGAACCTCCAGCACCACCAAACGCATCATGCTGGAGCAATATAGTGAAGAAGGAGGCACCGCCACCTCAACAACCACAACCAATTTTACAGACCGAACAAGTTTTAGAAGATGCTCGTAACAGTCATGGGATCTCTGTTGCTATTGTTGATGCCAATGCCGTTATTGCTGCCGGTGAAAAGCTTCATGGTATTGCTGATAAGTTTGTTTCTGTACCGGAAGTTATGGAGGAAATCCGTGATCCTGTTTCTCGCCATAAGCTCTCGTTTCTTCCATTTACTATCCAAACCATGGAACCAACCCCTGAATCCATCAACAAAgTTATCAAATTTGCTAGGATTACTGGTGATCTACAGACTTTATCAGATGTGGATATCAAACTCATGGCTCTAACTTATACTTTGGAGGCTCAGATTCACGGAACAAAACATCTCAGGGACAGCCCACCTCCTGTGCAAATGCTAAATGTGAAGAGGTTGCCCGAGAAGGACATGCCCGGATGGGGTTCGAATGTTCCTAATTTGGATGAGTGGGAAGCATTGGAACGCGAAACTGAGGACAATGCAAATTCCAATTCGAGAATCCTTCCTTTGCAGGACTTGAGTTTGAACATTGTTCCTCAAGATGATCAATCTGTAGATGGTTCAGTAGAGCATACAGGTGAAAATCCTTTGGAAATTCCGGATGGTGATGAAAGTGGTGGTTCAATGAGCCGTAAGAATTATATGCCTGAGAAGAAAGTGATAAACATTGAAGGGAAGATGGTGGCTGATGGAGTTGATGCATCTCAAGGACAAGTTGATGAAAATGGAGGTGATTGGATGCCTGCTGTCAGTCGTAGTACTCACAGGAGATTTCTAAGAAGGAAAGCTAGACGCGAGTACTATGATGCATTATCCAGCACTCAAGATCAACAAGACGTGGAAGAAAACATCAATGGTAGTGTTTATGAAGATGATAAGGCTTCAAACCGTGATGTTCATCAAAGTGATGAGGAGAATCATATTGAAAATGTTGTTTCCAAGGATGATGTGATATTTGCAGAGAACACTGATGGTGAAGCTCTCTCTGCAACTCTGAAGCAAATGACTCTGGAAGAAGGTTCACTTGAAGTTCTTAATGTAGAACAGAAACTAAGTTTGTCTCCTGAAGAATTGCAGTCAAGCAATGATGGACTACTGGAAAGTGCATCGGAGGGTAGTGCACCTATGGCTACTAAATCATGTGAAACAGATTCAGTCAATGACAAAGCAAATCACTTGGAGATTGCAAGCCAGACTAGTGAAGCTGCTGATGTTTCATATGCAGATGATGCCACCAGTGAGCAAAGTTGGATGCTTAGATCTTTGTCCGAATCAACTGTGGCCTGTATAACCGGTGACTTTGCAATGCAAAATGTTCTCCTCCAAATGGGTTTACGCTTGCTGGCACCTGGAGGATCGCAGGTACACGAGCTGCACAGATGGATACTTAAGTGTCATGCCTGTTTCGCTGTTACTGCTGAAATTGGGAGGATTTTCTGTCCAAAATGTGGAAATGGTGGCACCTTAAGGAAGGTTGCTGTCACTGTTAATGAAAATGGAGTAATGTTAGCAGCCCGTCGACCCCGAATTACATTACGTGGCACCAAATTTTCACTGCCATTACCCCAAGGTGGAAGGGATGCAATGACAAAAAATGTTATTCTCCGTGAAGATCAGCTACCTCAAAGGGTACTTCATCCTAAAACAAGGAAGAAAGCTAACAAGGATGATGATTGCTTTCTGCCGGACAATGTCTTCAGCCACCACAATTATAAGGGAACTCCTTTCACGCCTCCTGTAAGGAAAGCATTAGCAGTTTTCAGTGGAAAGAGAAATCCAAATGACAATCACTACTCAACTAAGCGTAAGTAG 1899 0.4308 MEEPPAPPNASCWSNIVKKEAPPPQQPQPILQTEQVLEDARNSHGISVAIVDANAVIAAGEKLHGIADKFVSVPEVMEEIRDPVSRHKLSFLPFTIQTMEPTPESINKVIKFARITGDLQTLSDVDIKLMALTYTLEAQIHGTKHLRDSPPPVQMLNVKRLPEKDMPGWGSNVPNLDEWEALERETEDNANSNSRILPLQDLSLNIVPQDDQSVDGSVEHTGENPLEIPDGDESGGSMSRKNYMPEKKVINIEGKMVADGVDASQGQVDENGGDWMPAVSRSTHRRFLRRKARREYYDALSSTQDQQDVEENINGSVYEDDKASNRDVHQSDEENHIENVVSKDDVIFAENTDGEALSATLKQMTLEEGSLEVLNVEQKLSLSPEELQSSNDGLLESASEGSAPMATKSCETDSVNDKANHLEIASQTSEAADVSYADDATSEQSWMLRSLSESTVACITGDFAMQNVLLQMGLRLLAPGGSQVHELHRWILKCHACFAVTAEIGRIFCPKCGNGGTLRKVAVTVNENGVMLAARRPRITLRGTKFSLPLPQGGRDAMTKNVILREDQLPQRVLHPKTRKKANKDDDCFLPDNVFSHHNYKGTPFTPPVRKALAVFSGKRNPNDNHYSTKRK 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00477 632 Gene3D - 478 552 IPR036283 -
Tsu02g00477 632 Pfam Nin one binding (NOB1) Zn-ribbon like 484 554 IPR014881 -
Tsu02g00477 632 MobiDBLite consensus disorder prediction 384 410 - -
Tsu02g00477 632 Pfam PIN domain of ribonuclease 50 136 IPR033411 -
Tsu02g00477 632 SUPERFAMILY NOB1 zinc finger-like 484 547 IPR036283 -
Tsu02g00477 632 Gene3D - 41 149 - -
Tsu02g00477 632 PANTHER RNA-BINDING PROTEIN NOB1 6 630 IPR039907 -
Tsu02g00477 632 CDD PIN_Nob1-like 50 161 IPR033411 -
Tsu02g00477 632 PANTHER - 6 630 - -
Tsu02g00477 632 MobiDBLite consensus disorder prediction 211 241 - -
Tsu02g00477 632 MobiDBLite consensus disorder prediction 1 29 - -
Tsu02g00477 632 MobiDBLite consensus disorder prediction 316 337 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00477 K11883 - gmx:100800291 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00477 02 3965376 3969170 Tsu02g00477 02 3965376 3969170 ECH