Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00475 ATGTCAGGAAGGCAGCTGCACTTCAAGTGTGAAAATTTCCAAAAGGGTGGAGCTTTTAAATTTAGAGGTGCTTGCAATGCTGTTTTCTCTCTCAATGATGAAGAGGCTTCTAAAGGGGTTATAACACACAGCAGTGGAAACCATGCTGCTGCATTGGCTTTGGCAGCAAAACTACGGGGGATCCCTGCATATATTGTTATTCCAAAAAATGCACCAACATGCAAAGTTGAGAATGTAAAGCGGTATGGTGGTCAGGTTATCTGGTCTGAGGCCAATATGCGATCAAGGGAAGAAGTTGCGAATAAAGTGTGGCAAGAAACTGGTGCTATCTTTATACATCCGTATAATGATGGGCGCATACTAAGTGGCCAGGGTACCATATCCTTGGAGTTTCTGGAACAAGCCCCTCAAATAGATACACTTGTGGTGCCGATAAGTGGTGGCGGTTTGATATCAGGAGTAGCATTGGCTGCCAAGTCCATCAATCCGGCTATTCGTATTTTGGCTGCCGAACCTAAAGGAGCTGATGATGCAGCACAATCTAAAGCGGCTGGTAGGATAATAACGTTGCCTGAGACCAATACTATAGCCGACGGGCTTCGAGCATTTCTCGGAGATTTCACATGGCCGGTCGTACGAGATCTTGTTGAGGACATAATAACTGTGGAGGACAGTGAAATTATTAAAGCCATGAAACTGTGTTTTGAAATTCTTAAGATTGTGGTAGAACCAAGTGGAGCAATCGGTCTTGCTGCTGTTCTATCCGAAACTTTTCAGAAAAATCCTGCTTGGAAGGATTGTAAACATATAGGGATAGTAGTTTCTGGAGGCAATGTTGATATGGCTGTGCTTTGGGattctttgaaaaaatga 873 0.433 MSGRQLHFKCENFQKGGAFKFRGACNAVFSLNDEEASKGVITHSSGNHAAALALAAKLRGIPAYIVIPKNAPTCKVENVKRYGGQVIWSEANMRSREEVANKVWQETGAIFIHPYNDGRILSGQGTISLEFLEQAPQIDTLVVPISGGGLISGVALAAKSINPAIRILAAEPKGADDAAQSKAAGRIITLPETNTIADGLRAFLGDFTWPVVRDLVEDIITVEDSEIIKAMKLCFEILKIVVEPSGAIGLAAVLSETFQKNPAWKDCKHIGIVVSGGNVDMAVLWDSLKK 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00475 290 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 11 24 IPR000634 GO:0006520|GO:0030170
Tsu02g00475 290 CDD Thr-dehyd 1 280 - -
Tsu02g00475 290 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 2 290 - -
Tsu02g00475 290 PANTHER - 2 290 - -
Tsu02g00475 290 Pfam Pyridoxal-phosphate dependent enzyme 3 276 IPR001926 -
Tsu02g00475 290 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 3 283 IPR036052 -
Tsu02g00475 290 Gene3D - 3 280 IPR036052 -
Tsu02g00475 290 Gene3D - 19 115 IPR036052 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00475 K12235 - gmx:100799758 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00475 02 3959761 3961603 Tsu02g00475 02 3959761 3961603 ECH