Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00465 ATGGTTGATTCAATTGCTGCAACTTCAATCTTTTGTTACCGTCCTATTTGTGGTGGAAATTTGATTAGGGATGTATCTGGAAAAAGGAAATATTTGAACACTTGTAGGTTTTCACCAGCTAAGTTTCTTGGTGGAAGGGTTGTTGTTTCATTGCCTTTGATTAAATCCAAACAAGATGGGTTCTTTTCGTCTTCTTCAATTAAGGCTCTTGCTGTTGAGCTTACAAGAGAAGCATTTGCTTATAGGGAAGACAAATTGCCAAAGAAAGGTAATAGTAAGATTGATGGTGGTTTTGATCGGAAGCCTGGTTTGTGGCCACCGGAAAATAGAGCGGATAAGCCTTCGCTTCGGAACCCTTTGCTTCGACAAGAGAGGATGGGATGTGGTTGGTTGGGTGCTATATTTGAGTGGGAGGGGGTTCTAATTGAAGATAATCCTGATTTAGAGAAGCAAGCTTGGCTTGCTCTTGCTCAAGAAGAAGGAAAACCCTCTCCTCCTGGTTTCGTAATCAAGAGAATCGAAGGCATGAAGAATGAACAAGCAATTTCTGAAGTGCTGTGTTGGGCTAGGGACCCGGCAGAGGTGAGAAGAATGGCTACTAGACAAGAAGAAATTTATCAAGTTTTACAAGGTGGGATATATAGTCTAAGGCCTGGGTCCAAAGAGTTTGTCGGTGTTTTGATGCATTATAAGATACCGATGGCTTTGGTTTCCGCACGGCCTAGAAAAGTTATTGAGACTGCTATGGGGGAAATTGGCATTGAAGAAAATTTCAGTGTTGTTGTTACAGCAGAGGATGTTCACAGGGGAAAGCCTGATCCAGAAATGTTTGAGTATGCAGCCCAGCTTTTGAACTTCATACCTGAGAGGTGCATTGTGTTTGGAAACTCAAATCTAACAGTGGAGGCTGCACATGATGCACGGATGAAGTGTGTCGCTGTTGCTAGCAAGCATCCTGTGTATGAGCTTGGAGCTGCAGACATGGTTGTGAGGCGCTTGGATGAGCTTTCAGTGGTTGATTTGAAGAATTTGGCAGACATTGAAACATCTGAATTTGGGCCAGAGCCAGAGTTGGAGATGGAGTTGGAAAACGATGATTTCTGA 1104 0.4312 MVDSIAATSIFCYRPICGGNLIRDVSGKRKYLNTCRFSPAKFLGGRVVVSLPLIKSKQDGFFSSSSIKALAVELTREAFAYREDKLPKKGNSKIDGGFDRKPGLWPPENRADKPSLRNPLLRQERMGCGWLGAIFEWEGVLIEDNPDLEKQAWLALAQEEGKPSPPGFVIKRIEGMKNEQAISEVLCWARDPAEVRRMATRQEEIYQVLQGGIYSLRPGSKEFVGVLMHYKIPMALVSARPRKVIETAMGEIGIEENFSVVVTAEDVHRGKPDPEMFEYAAQLLNFIPERCIVFGNSNLTVEAAHDARMKCVAVASKHPVYELGAADMVVRRLDELSVVDLKNLADIETSEFGPEPELEMELENDDF 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00465 367 Gene3D Putative phosphatase; domain 2 143 216 IPR023198 -
Tsu02g00465 367 PANTHER 5-AMINO-6-(5-PHOSPHO-D-RIBITYLAMINO)URACIL PHOSPHATASE, CHLOROPLASTIC 2 366 - -
Tsu02g00465 367 CDD HAD_BPGM-like 193 316 - -
Tsu02g00465 367 SUPERFAMILY HAD-like 133 336 IPR036412 -
Tsu02g00465 367 Gene3D - 133 331 IPR023214 -
Tsu02g00465 367 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 234 314 IPR006439 -
Tsu02g00465 367 MobiDBLite consensus disorder prediction 91 112 - -
Tsu02g00465 367 PANTHER BETA-PHOSPHOGLUCOMUTASE-LIKE ISOFORM X1 2 366 - -
Tsu02g00465 367 Pfam Haloacid dehalogenase-like hydrolase 147 314 IPR041492 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00465 K22912 - gmx:100798181 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00465 02 3891998 3893101 Tsu02g00465 02 3891998 3893101 ECH