Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00457 ATGGCATTAGATCCAAAACAAGTGAAATCAGACCTTGTTCTCATCCTCGATTTCGGTTCTCAATACACTCATCTCATCACTCGTCGAATCCGAAGCCTCTCCGTTTTCTCCCTCTGTCTCAACGGCACTTCCTCTCTTCAATCCATCACCGACCTTAACCCCGCCGTCGTCATTCTCTCCGGTGGTCCTCACTCCGTCCACACCCCCGACTCCCCTTCCTTCCCTGACGGTTTCCTTCAATGGGCTCAGTCTAATGCCGTCCCTGTCCTTGGTATTTGCTATGGTCTCCAGCTTCTTGTTAGCCGTCTTGGCGGTGAAGTTCGCGTTGGAAACACGCAGGAATATGGCCGTATGGAAATTCATGTTGAGAATCCATCGGCTCTTTACCCTGCCGAGAAAGTCGGACATAATCAAGTTGTTTGGATGAGTCATGGTGATGAAGCTGTTACTCTTCCTGACGGTTTTAATGTCGTGGCACGGAGTCAACAAGGTGCTGTTGCTGCGATAGAGAATCCATCTACCAAATTCTACGGTCTTCAGTATCATCCTGAGGTGACTCATACGCCTGAGGGAATGGAAACTCTGAAGCATTTTCTATTTGATGTTTGTGGAGTTGCAGCGGGGTGGAAGATGGAGGATGTAATGGAGGAAGAAATCAAAGTGATCAATAATACAGTGGGGCCTGATGAACATGTCATTTGTGCCTTATCTGGTGGTGTTGATTCCACTGTTGCTGCTACCATAGTTCATAAAGCCATTGGGGATAGGCTTCATTGTGTTTTTGTTGACAATGGCTTGCTCAGGTATAAGGAGAGGGAACGAGTGATGGAAACCTTTGAAAAGGATCTTCATTTACCGGTTGTGTGTGTTGATGCTGTAGATCAATTTCTTACAAAGCTAAAAGGTGTGACGGATCCTGAAATAAAGAGGAAAATTATTGGTAAAGAGTTCATTTGCATCTTTGATGCTTTTGCTCAGGATCTAGAGAAGAAACTGGGAAGCAGACCTGCTTACTTGGTTCAGGGAACCTTGTATCCTGATGTGATTGAATCATGTCCACCACCTGGAAGTGGGAGAACCCATTCCCATACCATCAAGAGCCATCATAATGTTGGTGGTCTTCCAAAGGACATGAAATTGAAACTTATTGAACCACTTAAACTACTTTTCAAGGATGAGGTTTTACTCTGGTTCTATTGTCTTGTTTCCTTGTGCTTGAAATTCGATTCTCTGATTGTTCCCGTCTATTTGTTTATCAAGTTATgcattgatttttaa 1278 0.4413 MALDPKQVKSDLVLILDFGSQYTHLITRRIRSLSVFSLCLNGTSSLQSITDLNPAVVILSGGPHSVHTPDSPSFPDGFLQWAQSNAVPVLGICYGLQLLVSRLGGEVRVGNTQEYGRMEIHVENPSALYPAEKVGHNQVVWMSHGDEAVTLPDGFNVVARSQQGAVAAIENPSTKFYGLQYHPEVTHTPEGMETLKHFLFDVCGVAAGWKMEDVMEEEIKVINNTVGPDEHVICALSGGVDSTVAATIVHKAIGDRLHCVFVDNGLLRYKERERVMETFEKDLHLPVVCVDAVDQFLTKLKGVTDPEIKRKIIGKEFICIFDAFAQDLEKKLGSRPAYLVQGTLYPDVIESCPPPGSGRTHSHTIKSHHNVGGLPKDMKLKLIEPLKLLFKDEVLLWFYCLVSLCLKFDSLIVPVYLFIKLCIDF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00457 425 Gene3D HUPs 210 397 IPR014729 -
Tsu02g00457 425 PANTHER GMP SYNTHASE-RELATED 5 394 - -
Tsu02g00457 425 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 12 208 - -
Tsu02g00457 425 Gene3D - 6 206 IPR029062 -
Tsu02g00457 425 PRINTS Glutamine amidotransferase superfamily signature 178 191 - -
Tsu02g00457 425 PRINTS Glutamine amidotransferase superfamily signature 57 66 - -
Tsu02g00457 425 PRINTS Glutamine amidotransferase superfamily signature 88 99 - -
Tsu02g00457 425 Pfam tRNA methyl transferase HUP domain 231 274 - -
Tsu02g00457 425 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 198 401 - -
Tsu02g00457 425 ProSiteProfiles GMP synthetase ATP pyrophosphatase (GMPS ATP-PPase) domain profile. 209 410 IPR025777 GO:0003921|GO:0005524
Tsu02g00457 425 PRINTS Anthranilate synthase component II signature 88 99 - -
Tsu02g00457 425 PRINTS Anthranilate synthase component II signature 57 66 - -
Tsu02g00457 425 PRINTS Anthranilate synthase component II signature 13 27 - -
Tsu02g00457 425 PRINTS Anthranilate synthase component II signature 178 191 - -
Tsu02g00457 425 PANTHER GMP SYNTHASE (GLUTAMINE-HYDROLYZING), PUTATIVE / GLUTAMINE AMIDOTRANSFERASE, PUTATIVE-RELATED 5 394 - -
Tsu02g00457 425 CDD GATase1_GMP_Synthase 13 199 IPR004739 GO:0003922|GO:0005524|GO:0006177
Tsu02g00457 425 TIGRFAM guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 13 205 IPR004739 GO:0003922|GO:0005524|GO:0006177
Tsu02g00457 425 Pfam Glutamine amidotransferase class-I 15 201 IPR017926 -
Tsu02g00457 425 SUPERFAMILY Class I glutamine amidotransferase-like 11 239 IPR029062 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00457 K01951 - gmx:100812448 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00457 02 3836233 3838481 Tsu02g00457 02 3836233 3838481 ECH