Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00453 ATGTGGTTTCTTGGTTGGAAAGGACCATCCGGTTTCTCAGCTTCATCAACTGCCGAACAAGTCACTCATGGAATTCATGGAACCTCTCTCACTGCAATCATCACagGTGCATCAAGTGGTCTTGGATTGGAAACAACTAGGGTTCTTGCTTTGCGTGGTGTTCATGTTGTTATGGCAGTGAGGAATGTGAAAAATGGTTTGATTATTAAAGAAACATTACTTAAGGAAATTCCTACTGCTAAAATTGATGTTTTTGAGTTAGATCTTAGTTCTTTAGCATCTGTTAGGAAATTTGCTGCAGATTTTAATTCCTCTGGTCTTCCACTCAATATTCTAATCAACAATGCAGGGTTGATGGCTACTCCATTCTTGCTTTCTGAAGACAATATTGAATTGCAGTTTGCAACCAATCATTTAGGCCATTTTCTGCTGACAAACCTTTTATTAGAGACTATGAAAAAAACTGTAAAGGAATGCAACCGGGAAGGAAGGATAGTTATTGTATCATCAGAGGCTCACAGATTTGCATATAGTGAAGGGATTCGTTTTGATAAGATCAACGATGAATCAGAATACAGCAGTTATTCTGCTTATGGACAATCCAAGCTCGCAAATATTTTGCATGCCAATGAGCTTGCAAGGCGCTTGAAGGAAGAAGGAGTGCAAATAACAGTTAACTCCCTTCATCCTGGTACAATTATTACAAATATTCTGCGGTATCATGCTTATTTTAATGCCGTTGCTAATATGGTGGGAAAGTACTTCCTTAAAAATGTGCAACAGGGAGCTGCAACTCAATGTTACCTTGCATTACATCCACAAGTAAATGGAATATCTGGTGAGTACTTTACGGATAGCAATAAGGCAACCCCAACCTCTTTAGCTAAAAATAAAGAGTTGGCGCAAAAACTATGGGAATTAAGTGCAAGTTTGTCTAATACAAAGTAG 948 0.3819 MWFLGWKGPSGFSASSTAEQVTHGIHGTSLTAIITGASSGLGLETTRVLALRGVHVVMAVRNVKNGLIIKETLLKEIPTAKIDVFELDLSSLASVRKFAADFNSSGLPLNILINNAGLMATPFLLSEDNIELQFATNHLGHFLLTNLLLETMKKTVKECNREGRIVIVSSEAHRFAYSEGIRFDKINDESEYSSYSAYGQSKLANILHANELARRLKEEGVQITVNSLHPGTIITNILRYHAYFNAVANMVGKYFLKNVQQGAATQCYLALHPQVNGISGEYFTDSNKATPTSLAKNKELAQKLWELSASLSNTK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00453 315 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 287 IPR036291 -
Tsu02g00453 315 CDD retinol-DH_like_SDR_c_like 31 305 - -
Tsu02g00453 315 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 2 311 - -
Tsu02g00453 315 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Tsu02g00453 315 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Tsu02g00453 315 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Tsu02g00453 315 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Tsu02g00453 315 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Tsu02g00453 315 Pfam short chain dehydrogenase 31 177 IPR002347 -
Tsu02g00453 315 Gene3D - 27 315 - -
Tsu02g00453 315 PANTHER RETINOL DEHYDROGENASE 2 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00453 Tsu-Chr2 3813249 3815717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00453 33 291 Acyl Lipid Metabolism Gene Families AT1G63380 26.838 1.20e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00453 - K19329 gmx:100785176 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00453 02 3813249 3815717 Tsu02g00453 02 3813249 3815717 ECH