Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00450 ATGCCACCATTTGCAGGTTCTCATCCAACTGGATTCTTAACATCTCAACAAAGAACAGATTCAAACATAGTCACAATCGACGTTGGCGGACAAATGTTTCAAACAACTAAACAAACATTAACCTCAGCAGGACCAAAAACTTTCTTCTCATCAATCTCACAAACTTCTTCACTTTTCACACCATTCATTGACAGAGACCCTGAAATTTTCTCACTCCTTCTCTCTCTTTTACGAACCGGTAATCTTCCTTCAAAAGCTAAATTATTCGATCTTCAAGACCTAATTATTGAATCTCAATTTTACGGTATTGAAAATCTCTTAATTAACTCTCTCTCTAATCCAGAACAATTAGAACCTTTTAATCTTCAAAAATCACTTCAGTTACCTTTAAACGGAAGAGATTCTCCTTCCACCGTCGCAACTACACCTTACGGTTCTCTTCATGTTGCACATGGTAGCAAAATCACGACGTTTGATTGGTCTCTTCGTCGGAAATCGACTGTTTTAACGCACTTTACGGCAGTTGATTCTCTTCTTGCTTTATCGCCGTCGTTGGCCGCCGCCGGTGCTAATGATTTCTCCGGTCTTCAGATTCTTGATTTGGAAAACGGTTATGTGAAGGATACGTTAAATTGGGAAAACGTAACGAAATCTGGTTCAACCGTTCAAGCTATTGGATCTTCGCCGGAGCAAATGTTTGTAAGCTTTGAATCTTCTCGGAGAAACTCGAATTCGATTGTTGTTTATGATTTACATAGCTTGAGACCAGTAACAGAAATTGCACACAATGAGATCTATGGTGCTGATATCGATTCAGCGATTCCGGCGACGAAATTGCAGTGGATTGAAAGTCATAATCTGTTAATGGCGTCTGGGTCTCACAGTGGTCCTTCTGGTGTTTCCGGTAATATTAGGTTATGGGATGTTCGTTCCGGTAATGTTGTTTGGGAGATTTCTGAGAAAGTTGATTGTTTTGCTGACGTGGCAGTTTCTGATTCTTTGAATGCTATGTTCAAAATTGGTGTGAATTCTGGTGAAACGTTTTATATGGATTTGAAGAATTTGGGTGCTGAGAAAAGTTCATGGGTTTGTTTAGGTGATAAGAGAAAGGTTTTGAATGGTAAAAAAGAAGGGTTTGGTTGCAAAATTGAAACACAAGGGAATCAAGTTTTTTGTACTAAAGGTGGTGATGTTGAACTATGGTCAGAGATTATAATGGGTTCTTCTAATAATAGGATTTTCAAGAAGAATTTGATGGGAAGAGTGCAAGATATGGGAGGTGCTAAGATTACTAATTTGGCTTTTGGTGGAAGTAGAATGTTCTTGACTAGAAAGGATTTGCAATGTGTTGAAGTTTGGCAGAGTTCTTCAAGGGAACTTTGA 1383 0.3868 MPPFAGSHPTGFLTSQQRTDSNIVTIDVGGQMFQTTKQTLTSAGPKTFFSSISQTSSLFTPFIDRDPEIFSLLLSLLRTGNLPSKAKLFDLQDLIIESQFYGIENLLINSLSNPEQLEPFNLQKSLQLPLNGRDSPSTVATTPYGSLHVAHGSKITTFDWSLRRKSTVLTHFTAVDSLLALSPSLAAAGANDFSGLQILDLENGYVKDTLNWENVTKSGSTVQAIGSSPEQMFVSFESSRRNSNSIVVYDLHSLRPVTEIAHNEIYGADIDSAIPATKLQWIESHNLLMASGSHSGPSGVSGNIRLWDVRSGNVVWEISEKVDCFADVAVSDSLNAMFKIGVNSGETFYMDLKNLGAEKSSWVCLGDKRKVLNGKKEGFGCKIETQGNQVFCTKGGDVELWSEIIMGSSNNRIFKKNLMGRVQDMGGAKITNLAFGGSRMFLTRKDLQCVEVWQSSSREL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00450 460 SMART BTB_4 22 118 IPR000210 GO:0005515
Tsu02g00450 460 Gene3D Potassium Channel Kv1.1; Chain A 13 120 IPR011333 -
Tsu02g00450 460 Gene3D - 137 460 IPR015943 GO:0005515
Tsu02g00450 460 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 1 458 IPR045068 -
Tsu02g00450 460 SUPERFAMILY POZ domain 21 109 IPR011333 -
Tsu02g00450 460 SUPERFAMILY WD40 repeat-like 124 354 IPR036322 GO:0005515
Tsu02g00450 460 CDD BTB_POZ_KCTD-like 24 101 - -
Tsu02g00450 460 Pfam BTB/POZ domain 24 110 IPR003131 GO:0051260
Tsu02g00450 460 PANTHER PROTEIN BINDING PROTEIN 1 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00450 Tsu-Chr2 3788506 3790404 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00450 - - gmx:100792189 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00450 02 3788506 3790404 Tsu02g00450 02 3788506 3790404 ECH