Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00447 ATGGCACGTTTGGTTCTTCCATCGAAGACTCTGGCTTTTTCCAGGAAGAGTCTACTGAGTTTGATCTCACCTGCTCCTCTTCAGATTAGTTGCAGCGTTAATTGTTTTCGGAAGACCTCGAGTGTCAGATATAGGCATTTCCTTGCATCAGAGGTTGTTCTCCGAAAGAATTGTTCCCCGTTTTATTCTTCGGTACCGAAGGTCAGGAAAGCGAGTAGGAAGCTAATTTGTTCGGTTGCCACTGAACCAAAGCAAGCTGAAGAATCTAAAATGGCGCAGCCAAGAGAAATATTCTTAAAGGATTACCAAAAGCCTGATTACTACTTTGAGACTGTGGATCTGAAATTTTCCTTAGGAGAGGAGAAGACAATAGTTAGTTCTAAAATTGCCGTGTTTCCTCGTGTTGAAGGTTCTTCTCCCCCGCTAATTTTAGATGGACAAGACATGACTTTAGTTTCAGTCCAGATTAATGGCAAGGCCTTGAAGGAGGAAGATTATCATTTGGATGCACGCCATCTAACAATTCAATCACCTCCTAGTGGTAAATATGATCTTGAAATTGTTACTGAGATTCTCCCACAGAAAAACACATCATTGGAGGGACTTTACAAGTCATCCGGGAATTTCTGTACTCAATGTGAGGCTGAAGGCTTCCGTAAAATCACATATTATCAGGATCGGCCTGACATAATGGCAAAGTATACAGTTCGCATTGAGGCAGACAAATCACTGTATCCAGTATTGTTGTCTAATGGAAACCTGGCTGGACAGGGTGACTTGGAGGGTGGCAAACATTATGCTGTTTGGGAGGACCCCTTCAAGAAACCTTGTTATTTGTTTGCCTTAGTCGCCGGGCAATTGGAGAGCAGAGATGACACATTTACTACCCGCTCAGGAAGGAAGGTGTCCCTTAGGATCTGGACGCCTGCAGATGACGTACCTAAGACTGCACATGCTATGTATTCTCTGAAAGCAGCTATGAAGTGGGATGAAGATGTTTTTGGACTTGAATATGATCTGGATCTCTTCAACATCGTTGCTGTCCCAGATTTTAATATGGGAGCCATGGAAAACAAAAGTTTGAATATTTTCAATTCCAAGCTTGTATTGGCTTCTCCAGAGACTGCTTCGGATGCAGATTATGCTGCAATATTGGGAGTTATTGGCCATGAGTATTTCCACAATTGGACTGGCAACAGAGTGACATGTCGCGACTGGTTCCAGCTTAGTCTGAAGGAAGGTCTCACTGTTTTTCGTGATCAGGAATTCTCATCTGACATGGGAAGCCGTACTGTGGAGCGGATTGGCGATGTTTCAAAACTTAGGAATTACCAGTTTCCACAGGATGCAGGTCCCATGGCCCATCCAGTGCGACCACACTCTTACATCAAGATGGACAACTTCTACACAGTCACGgtCTATGAAAAGGGGGCTGAAGTTGTTCGAATGTACAAAACCTTATTGGGAAGTCAAGGGTTCCGAAAGGGCATGGATCTTTATTTTAAGAGACATGATGGGCAAGCTGTAACATGCGAAGACTTTTTCGCTGCCATGCGAGATGCAAATAATGCAGATTTTGCAAATTTCCTATTGTGGTACTCTCAAGCTGGGACTCCTATTGTTAAAGTAAATACTTCTTATAATGCAGAAGGACACACATTTACTTTGAAGATCAGTCAAGAGATACCACCAACTCCAGGGCAATCCGTTAAGGAACCAATGTTCATTCCTATTGCAGTAGGTTTGCTTGATTCAACTGGGAAGGACATTCCTCTTTCCTCTATTTATCATGACGGGGCTTTGCAATCTGTTTCAAGCAATGACCAATCAGTCTCCACTACAGTCCTTAGAGTCACTAAGAAAGAAGAAGAGTTTGTATTCACTGATATCTTTGAGAGGCCTGTTCCATCTTTGTTAAGGGGATACAGTGCTCCTATTCGTCTCGAATCTGATGTCACTGATGATGACCTGTTTTTCCTATTAGCCAATGATTCTGATGAATTCAACCGATGGGAGGCTGGACAAATTTTGGCAAGAAAGTTGATGCTCAGCTTGGTGGATGATTTCCAACATAATAAGCCCTTGGTTCTGAATTCCAATTTTCTTGAGGGGTTCAGACGTATCCTATCTGACTCAAGTCTGGACAAAGAATTTGTGGCTAAGGCAATAACTCTACCCGGTGAGGGAGAAATAATGGACTTGATGAAAGTTGCAGACCCTGATGCTGTTCATACTGTTCGGTCTTTCATCAGGAAGCAGCTTGCAAGTGAACTGAGATCAGAATTCCTTAGCACAGTAGAAAATAATAGGAACTCAGGAGAATATGTGTTTGATCATTCAAACATGGCCAGACGAGCTTTGAAGAACATTGCTCTTGCTTATCTTGCATCCCTCGAGGAACAAGAATTCACCAACCTTGCACTTCAAGAATACAAAACTGCTACAAATATGACCGAGCAGTTTGCAGCATTGGCTTCCGTGGCCCAGAACCCTGGTAAAACTCGTGATGATGTTCTTGCTGACTTTTATCACAAGTGGCAGAATGATTACTTGGTGGTGAACAAATGGTTTGCTCTTCAAGCAGTGTCTGACATTCCTGGTAATGTTGAGAATGTGCGGAAACTGTTGAACCACCCAGCATTTGACTTGCGCAATCCCAACAAAGTGTACTCTCTCATTGGAGGTTTCTGCGGGTCTCCTGTGAACTTCCATGCAAAGGATGGCTCAGGCTACGAGTTTTTGGGCGATATTGTGCTGCAACTTGACAAAATAAATCCTCAGGTTGCCTCAAGAATGGTGTCAGCCTTCTCAAGATGGAAGCGTTACGATGACACCAGACAAAAACTTGCAAAGGCCCAGCTTGAGAAGATCATGTCTACTAATGGCCTATCAGAGAATGTGTTCGAAATTGCTTCAAAAAGCTTAGCTGCTTAA 2934 0.4308 MARLVLPSKTLAFSRKSLLSLISPAPLQISCSVNCFRKTSSVRYRHFLASEVVLRKNCSPFYSSVPKVRKASRKLICSVATEPKQAEESKMAQPREIFLKDYQKPDYYFETVDLKFSLGEEKTIVSSKIAVFPRVEGSSPPLILDGQDMTLVSVQINGKALKEEDYHLDARHLTIQSPPSGKYDLEIVTEILPQKNTSLEGLYKSSGNFCTQCEAEGFRKITYYQDRPDIMAKYTVRIEADKSLYPVLLSNGNLAGQGDLEGGKHYAVWEDPFKKPCYLFALVAGQLESRDDTFTTRSGRKVSLRIWTPADDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVERIGDVSKLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTVTVYEKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANNADFANFLLWYSQAGTPIVKVNTSYNAEGHTFTLKISQEIPPTPGQSVKEPMFIPIAVGLLDSTGKDIPLSSIYHDGALQSVSSNDQSVSTTVLRVTKKEEEFVFTDIFERPVPSLLRGYSAPIRLESDVTDDDLFFLLANDSDEFNRWEAGQILARKLMLSLVDDFQHNKPLVLNSNFLEGFRRILSDSSLDKEFVAKAITLPGEGEIMDLMKVADPDAVHTVRSFIRKQLASELRSEFLSTVENNRNSGEYVFDHSNMARRALKNIALAYLASLEEQEFTNLALQEYKTATNMTEQFAALASVAQNPGKTRDDVLADFYHKWQNDYLVVNKWFALQAVSDIPGNVENVRKLLNHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYEFLGDIVLQLDKINPQVASRMVSAFSRWKRYDDTRQKLAKAQLEKIMSTNGLSENVFEIASKSLAA 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00447 977 PANTHER BNAC06G01820D PROTEIN 55 471 - -
Tsu02g00447 977 PANTHER BNAC06G01820D PROTEIN 472 977 - -
Tsu02g00447 977 Gene3D tricorn interacting facor f3 domain 104 287 IPR042097 -
Tsu02g00447 977 Gene3D - 289 372 - -
Tsu02g00447 977 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 93 285 IPR042097 -
Tsu02g00447 977 PANTHER - 55 471 IPR012779 GO:0008270
Tsu02g00447 977 PANTHER - 472 977 IPR012779 GO:0008270
Tsu02g00447 977 Gene3D Neutral Protease Domain 2 373 536 IPR027268 -
Tsu02g00447 977 Pfam Domain of unknown function (DUF3458) Ig-like fold 537 650 IPR035414 -
Tsu02g00447 977 Pfam Peptidase M1 N-terminal domain 105 279 IPR045357 -
Tsu02g00447 977 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 297 543 - -
Tsu02g00447 977 Gene3D - 537 650 IPR038438 -
Tsu02g00447 977 TIGRFAM pepN_proteo: aminopeptidase N 101 975 IPR012779 GO:0008270
Tsu02g00447 977 CDD M1_APN 101 534 - -
Tsu02g00447 977 Pfam Domain of unknown function (DUF3458_C) ARM repeats 654 976 IPR024601 -
Tsu02g00447 977 PRINTS Membrane alanyl dipeptidase (M1) family signature 219 234 IPR001930 GO:0006508
Tsu02g00447 977 PRINTS Membrane alanyl dipeptidase (M1) family signature 269 284 IPR001930 GO:0006508
Tsu02g00447 977 PRINTS Membrane alanyl dipeptidase (M1) family signature 351 361 IPR001930 GO:0006508
Tsu02g00447 977 PRINTS Membrane alanyl dipeptidase (M1) family signature 387 402 IPR001930 GO:0006508
Tsu02g00447 977 PRINTS Membrane alanyl dipeptidase (M1) family signature 406 418 IPR001930 GO:0006508
Tsu02g00447 977 Gene3D - 652 976 IPR037144 -
Tsu02g00447 977 Pfam Peptidase family M1 domain 321 529 IPR014782 GO:0008237|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00447 Tsu-Chr2 3758480 3767802 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00447 K01256 - gmx:100775476 1746.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00447 02 3758480 3767802 Tsu02g00447 02 3758480 3767802 ECH