Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00422 ATGCCTTCTTCAGTTCGTAGATTAACAATGGCAGTTATAACTAACTCCTTATCACTCAAACACACTCTCTCTCTTGGTTACCCCCAAAGAAAAATTCTAACTCGTCCTTCTTCAACTTCGCTATCATTCAGAAGATGTTATGCATCTTACGCAAATGAAAATCGCGAGTATGTCATCGTTGGCGGAGGAAACGCGGCGGGATATGCTGCTCGTACTTTTGTTGAGCACGGTGTCGCCGATGGACGTCTTTGTATTGTTACAAAAGAGGGAGTTGCACCTTACGAGCGTCCCGCATTAACAAAAGCATACTTGTTTCCACCGGAAAAGAAACCTGCACGTCTTCCTGGATTTCACACTTGTGTTGGATCTGGTGGCGAAAGGCAAACTCCGGATTGGTATAAAGAGAAAGGAATAGAGATGTTGTATGAAGATCCAGTAGAAAACATTGATATTCAAAAGCAAACCTTGACAACAAGTTCTGGAAAGCTTCTTAAGTATGGATCGCTCATTATCGCTACAGGATGTACATCTTCAAGGTTTCCAGACAAAATTGGGGGAAACCTATCTGGTGTTCACTATATTCGGGATGTTGCCGATGCTGATTCACTGGTTTCATCGTTGgaaaaagcaaaaaaggTTGTAGTAGTTGGAGGTGGTTATATTGGAATGGAGATTGCTGCTGCAGCTGTTGCTTGGAAACTTGATACAACAATCATATTTCCAGATGATCATTTTTTACAAAGATTGTTCACTCCTTCTCTTGCCCGGAGATATGAAGAACTCTACCAAAAGAATGGAGTCAAAATATTGAAGGGTGCCTCCATTAAAAATTTGGAAGCTAGTTCTAATGGTAACGGACGTGTAGCTGCtgtgaaacttgaagatggatCTATTGTTGAAGCAGATACGGTAATTATAGGTATTGGTTCGAAGCCTGCTGTGGGTCCCTTTGAGAAGCTGGGTTTGAATACTGATGTTGGTGGTATACAGGTTGATGGTCAGTTCCGGACAAGCATTCCTGGAATATTTGCTGTTGGTGATGTAGCTGCTTTCCCTTTAAAGATCTACGACCGTATTTCTCGAGTGGAACATGTAGATCATGCTCGTAGATCGGCACAGCACTGTGTGAAAGCATTACTCAGTGCACAAACTAGCACGTATGATTATCTTCCGTACTTCTACTCAAGGGTTTTTGAATATGAAGGAAGCACTAGAAAAGTATGGTGGCAGTTTTTCGGAGACAATGTTGGAGAAACAGTAGAAATTGGAAACTTTGATCCTAAAATAGCTACATTTTGGATCGAATCTGGTAAGCTGAAGGGAGTTCTTGTTGAAAGTGGGAGCCCTGAGGAATTTAAGCTCCTGCCTGAACTTGCCAGAAGGCAGCCTCCAATTGATAAAGCCAAACTTCAAAACGCAAGCTCAGTGGAGGAGGCCCTAGACATTGCTCGAGGATCCTTGCAAGCAGCTGTCTAG 1476 0.4173 MPSSVRRLTMAVITNSLSLKHTLSLGYPQRKILTRPSSTSLSFRRCYASYANENREYVIVGGGNAAGYAARTFVEHGVADGRLCIVTKEGVAPYERPALTKAYLFPPEKKPARLPGFHTCVGSGGERQTPDWYKEKGIEMLYEDPVENIDIQKQTLTTSSGKLLKYGSLIIATGCTSSRFPDKIGGNLSGVHYIRDVADADSLVSSLEKAKKVVVVGGGYIGMEIAAAAVAWKLDTTIIFPDDHFLQRLFTPSLARRYEELYQKNGVKILKGASIKNLEASSNGNGRVAAVKLEDGSIVEADTVIIGIGSKPAVGPFEKLGLNTDVGGIQVDGQFRTSIPGIFAVGDVAAFPLKIYDRISRVEHVDHARRSAQHCVKALLSAQTSTYDYLPYFYSRVFEYEGSTRKVWWQFFGDNVGETVEIGNFDPKIATFWIESGKLKGVLVESGSPEEFKLLPELARRQPPIDKAKLQNASSVEEALDIARGSLQAAV 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00422 491 PANTHER MONODEHYDROASCORBATE REDUCTASE, CHLOROPLASTIC/MITOCHONDRIAL 35 489 - -
Tsu02g00422 491 PANTHER APOPTOSIS-INDUCING FACTOR 1 35 489 - -
Tsu02g00422 491 Gene3D - 392 478 IPR016156 GO:0016491|GO:0050660
Tsu02g00422 491 SUPERFAMILY FAD/NAD(P)-binding domain 51 379 IPR036188 -
Tsu02g00422 491 PRINTS Pyridine nucleotide disulphide reductase class-I signature 302 316 - -
Tsu02g00422 491 PRINTS Pyridine nucleotide disulphide reductase class-I signature 56 78 - -
Tsu02g00422 491 PRINTS Pyridine nucleotide disulphide reductase class-I signature 212 237 - -
Tsu02g00422 491 PRINTS Pyridine nucleotide disulphide reductase class-I signature 342 349 - -
Tsu02g00422 491 Gene3D - 58 375 IPR036188 -
Tsu02g00422 491 PRINTS FAD-dependent pyridine nucleotide reductase signature 58 77 - -
Tsu02g00422 491 PRINTS FAD-dependent pyridine nucleotide reductase signature 166 184 - -
Tsu02g00422 491 PRINTS FAD-dependent pyridine nucleotide reductase signature 301 317 - -
Tsu02g00422 491 PRINTS FAD-dependent pyridine nucleotide reductase signature 327 349 - -
Tsu02g00422 491 PRINTS FAD-dependent pyridine nucleotide reductase signature 212 230 - -
Tsu02g00422 491 Gene3D - 180 309 IPR036188 -
Tsu02g00422 491 Pfam Pyridine nucleotide-disulphide oxidoreductase 56 372 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00422 Tsu-Chr2 3553354 3558520 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00422 163 353 Acyl Lipid Metabolism Gene Families AT1G48030 26.866 2.63e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00422 K08232 - gmx:100819919 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00422 02 3553354 3558520 Tsu02g00422 02 3553354 3558520 ECH