Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00417 ATGAAGTGCAAATCCGTTGCGTGCATATGGTCAGGCACACTCTTCCCTTCCGCTCACAAAGTTACCGCCGTCGCTGCTTTCACCCAACCACCGTCACCCGCCTTTTACACCGCCGGATCCGATGGCTCCATCATCTGGTGGTCCTTTTCCACTTCCTCTTCCTCTCCGGAAGTTAAAGCGGTTGGAGTGTTGTGTGGTCATGCATCACCAGTCACTGATCTCGCTCTTTGTAGTCCAATTGCAGCTGAAGAAAACGATACCGTTTCAAGTAGAAATAATTTCAATGCTTTGATTAGTGCTTGTTCTGATGGTTTCTTGTGTGTGTGGAGTAAAAGTAGTGGACATTGTCGTTGCAGAAGGAAATTGCCACCTTGGGTTGGTACTCCTCTTGTAATTCGAACATTGCCTTCGACTCCAAGATATGTATGTATAGCTTGTTCTTTTGTGGATAATTATTCTGTTAATGATGAGTTAGGAGATAGAGAAAATCATTACAGGAGTAACTCTAAATCTACTATCCTTATTGTGGATACATATTTGCTTTCCATTACTCAAACTGTTCTTCATGGAAATTTATCTATTGGTTCTATCAAGTTTATGTCACTAGTTTTTTCTGACGATGATGAGAAGAGGAATTCAGTGTTTGTGGCCGATTCTTATGGGAAACAACAGATGGTTCCGATATCGGATGAGTCACGTAATTGTGTGGAAAATTTGGTGAGTCCGCACAGTGACAAGTCTCCATCGGGAAGTTCTTTTCATGTGGAGGGATTCAGCAGTGTGGATGAAGTTATTTCAGTTTTAACGTTTGGGAACATTGTTGCTTTTATATTGAAAGATAGATGTATTTTTAGGTCATTGTCTAGCGATATCACGATTGGAGAGGTTTCTTTTGTGAACAACCTCTTCTTTTCGGATGGGAATTCCACTGAAGCTCATGCTATTGGTGGCGTTGTTCTTGAAAGTGATGATATGGGGAATACGCCTGATACATATGATTGCAGCAACTTCATTCCAGTATATTTTGTTGTGTGGAATAATAGAGGTTATGCAATTACCTATGAAGTATCGTATCAGAATGATGTGTTTCAGTGTGTACCCTATTCTGAGATTCCTGGTGGTCATTATCAATCTGATATAagattatctattttttttctacaaGTAAATCAAAATCTCGTGTGTATCAAGTCAGTTTGCTTTCATCACGAGGAACCTTTACTATGGAGACCACATATCACAATTTGGTCGCTGCATCAATTTGATGATAAACCCGGAAAATTGTGCCGTCAGTGCAGAACAATCAATGATGGTGTATCTTCCAACAACTGGTTTGAGATGTCTACTCAACTCAATAGTCATGGTGATCTAGAGACTAAATCAACTTTTGGTGGTGCAAGTCCAGGTTCTGAAGACATACGCAACATACATGAGGATAGCATATGTAGTTATTATCCTTACAAGGGGCAGATAGTTTCTTCTTCCATGATTGTTGCTGAGAACCTCTTTACACCTTATGCCATCGTATACGGATATTTTAGTGGAGAAATAGAGGTCGTAAGATTTGATCAGTTTCAAGGGATTTTCCCAGACGATGCAAGTTCCAATCATGATGAAAAGTCAGCTGCCCACAAACAGCATTTCTCAGGACATACAGGTTCTGTACTTTGTTTGGCAGCACATCAAATGACGTGTAGTGCAAAAAGCTCCACCTTTAAACGGGTTTTGGTGTCTGGCAGTATGGATTGCACAGTTCGTATATGGGATCTTGACACTGGCAGTCTTATTAAGGTAATGCATCATCATGTTGCCGCTGTGCGTCAAATTATTCTTCCCCCATCAATGACAGGACATCCTTGGAGTGACTGCTTTCTTTCAGTGGGAGAGGATGCATGTGTTGCCCTTGTTTCTCTTGAGACTCTGCAGGTGGAAAGAATGCTTCCTGGACACATGAACTATCCCTCAAAAGTTTTATGGGATGGTGCAAGAGGTTATATTGCCTGTCTCTGTCAATCACATTATGGAACTTCCGATAGGGATGTATTATACATTTGGGATGTAAAGACAGGTTCTCGTGAGCGACTGCTACGCGGGACCACTGCACATTCAATGTTTGATCATTTTTGTAAGAATATCAGTATGAATTCTATACCTGGCTCTGTACTGAATGGAAATACATCAGTCTCTTCATTACTTCTTCCAATAGTTGATGACGCAAGGTTCTCTAACTCGCCCTTAAGTCATACAGAGAACTTGCTTACTTCATCAAAGTCATCACCAAATATTTCAAGTATGAATGAGCTGAATTCTTCAAAACCAAATGTAGGTAAAGGAAATTCAGCAAAGCCAAATTCATCTTTGTTTGGTCTTTTGAGTAACAACCTTCCTATCAAATGCTCTTGCCCGTTCCCTGGTATTGTGTCTCTGAGTTTTGATCTTGCATCATTGATGTTCTCCCTTCAAAAGAATGAGTCCAAGAAGACTGGTGATGGCAAGCCAGTGAATATCAATTTCAAGCAGAAGGGTGTTCAGGAGCAAATTCCAAGCTCCCATAATCCAGAAACATCAGAAGGGTGTGATTGGGTTAGcctttttgaagaatatttacTGCGATACAGTTTGTCATTTTTACATTTGTGGAACGTAGACAGTGAGCTTGATAATTTGCTGATAAGTGATATGAAACTAAGGAGGCCAGAAAATTTTATGATAGCTTCGGGTCTGCAGGGAGACAAAGGGTCATTGACATTGTCATTTCCTGGTCAGAGTGCTACTCTTGAGCTTTGGAAATCCTCATCCGAGTTTTCTGCAATGAGATCATTGACAATGGTATCCCTTGCTCAGCGTTTGATTAGCTTGTCTCACTCAAGTTCAGCTGCCAGCAGTGCATTAGCAGCATTCTATACCCGAAATTTCATGGAAAACTTTCCAGATATGAAGCCACCTTCGCTACAGCTCTTGGTGGCCTTTTGGCAAGATGAAAGTGAACATGTACGTATGGCTGCACGCTCTATATTTCACTGTGCTGCCTCTCATGCTATTCCTTTACCTCTATGCAATTCAAAATCCAATGAGTCAAATAATACAATCTCCCGAAATGGAAGTAGAGACAAACGCCAGGGAGATGCAACAGTAGAAAGCATATCACCTAATGCCAAAAAACAAGGAATTTCCCAAGATGAGGAATCCAAGATACTTAATTGGCTAGAATCTTATGAAGTGCAAGATTGGATTTCTTGTGTTGGGGGAACAAGCCAAGATGCAATGACATCTCACATTATTGTTGCCGCTGCACTCGCTATCTGGTATCCTAGTCTTGTAAAACCTAGGCTTTCCATGTTAGTTGTTCATCCATTAATGAAGTTGGCTATGGCCATGAATGAGAAGTACAGCTCCACTGCTGCTGAGCTCCTTGCAGAGGGCATGGAGAGCACGTGGAAAGAATGCATGGTCTCTGAGATTCCTCGTCTAATTGGGGACATTTTTTTCCAAGTAGAGTTGAGTGGTCCATCTTCCAAGTCAGTGACAGAAACTCCAGCTGCATCTTTTTCTATTAAACAGACTTTGGTGGAGATTCTCCTTCCAAGTTTAGCAATGGCTGATATACCAGGATTTTTGGCAGTGATTGAAAGCCAAATTTGGTCAACTGCATCTGATTCACCTGTCCACTTGGTATCCTTATTGACTATCATAAGGATTACGCGTGGTTCTCCAAGATATTTGGCTCAGTACCTTGACAAGGTTTGTAATGCTACTTCTTACTAG 3765 0.4085 MKCKSVACIWSGTLFPSAHKVTAVAAFTQPPSPAFYTAGSDGSIIWWSFSTSSSSPEVKAVGVLCGHASPVTDLALCSPIAAEENDTVSSRNNFNALISACSDGFLCVWSKSSGHCRCRRKLPPWVGTPLVIRTLPSTPRYVCIACSFVDNYSVNDELGDRENHYRSNSKSTILIVDTYLLSITQTVLHGNLSIGSIKFMSLVFSDDDEKRNSVFVADSYGKQQMVPISDESRNCVENLVSPHSDKSPSGSSFHVEGFSSVDEVISVLTFGNIVAFILKDRCIFRSLSSDITIGEVSFVNNLFFSDGNSTEAHAIGGVVLESDDMGNTPDTYDCSNFIPVYFVVWNNRGYAITYEVSYQNDVFQCVPYSEIPGGHYQSDIRLSIFFLQVNQNLVCIKSVCFHHEEPLLWRPHITIWSLHQFDDKPGKLCRQCRTINDGVSSNNWFEMSTQLNSHGDLETKSTFGGASPGSEDIRNIHEDSICSYYPYKGQIVSSSMIVAENLFTPYAIVYGYFSGEIEVVRFDQFQGIFPDDASSNHDEKSAAHKQHFSGHTGSVLCLAAHQMTCSAKSSTFKRVLVSGSMDCTVRIWDLDTGSLIKVMHHHVAAVRQIILPPSMTGHPWSDCFLSVGEDACVALVSLETLQVERMLPGHMNYPSKVLWDGARGYIACLCQSHYGTSDRDVLYIWDVKTGSRERLLRGTTAHSMFDHFCKNISMNSIPGSVLNGNTSVSSLLLPIVDDARFSNSPLSHTENLLTSSKSSPNISSMNELNSSKPNVGKGNSAKPNSSLFGLLSNNLPIKCSCPFPGIVSLSFDLASLMFSLQKNESKKTGDGKPVNINFKQKGVQEQIPSSHNPETSEGCDWVSLFEEYLLRYSLSFLHLWNVDSELDNLLISDMKLRRPENFMIASGLQGDKGSLTLSFPGQSATLELWKSSSEFSAMRSLTMVSLAQRLISLSHSSSAASSALAAFYTRNFMENFPDMKPPSLQLLVAFWQDESEHVRMAARSIFHCAASHAIPLPLCNSKSNESNNTISRNGSRDKRQGDATVESISPNAKKQGISQDEESKILNWLESYEVQDWISCVGGTSQDAMTSHIIVAAALAIWYPSLVKPRLSMLVVHPLMKLAMAMNEKYSSTAAELLAEGMESTWKECMVSEIPRLIGDIFFQVELSGPSSKSVTETPAASFSIKQTLVEILLPSLAMADIPGFLAVIESQIWSTASDSPVHLVSLLTIIRITRGSPRYLAQYLDKVCNATSY 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00417 1254 MobiDBLite consensus disorder prediction 1044 1058 - -
Tsu02g00417 1254 MobiDBLite consensus disorder prediction 1025 1058 - -
Tsu02g00417 1254 Gene3D - 446 787 IPR015943 GO:0005515
Tsu02g00417 1254 Gene3D - 5 255 IPR015943 GO:0005515
Tsu02g00417 1254 SMART WD40_4 5 48 IPR001680 GO:0005515
Tsu02g00417 1254 SMART WD40_4 57 110 IPR001680 GO:0005515
Tsu02g00417 1254 SMART WD40_4 592 637 IPR001680 GO:0005515
Tsu02g00417 1254 SMART WD40_4 541 589 IPR001680 GO:0005515
Tsu02g00417 1254 SMART WD40_4 640 686 IPR001680 GO:0005515
Tsu02g00417 1254 ProSitePatterns Trp-Asp (WD) repeats signature. 576 590 IPR019775 -
Tsu02g00417 1254 MobiDBLite consensus disorder prediction 749 780 - -
Tsu02g00417 1254 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1251 - -
Tsu02g00417 1254 SUPERFAMILY WD40 repeat-like 13 703 IPR036322 GO:0005515
Tsu02g00417 1254 PANTHER RABCONNECTIN-3B, ISOFORM A 1 1251 - -
Tsu02g00417 1254 Pfam WD domain, G-beta repeat 61 110 IPR001680 GO:0005515
Tsu02g00417 1254 Pfam WD domain, G-beta repeat 546 589 IPR001680 GO:0005515
Tsu02g00417 1254 ProSiteProfiles Trp-Asp (WD) repeats profile. 548 598 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00417 K24738 - gmx:100818675 1837.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00417 02 3504761 3511051 Tsu02g00417 02 3504761 3511051 ECH