Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00412 atggctTATACACAAAGAGAGCAATTCAAACCTGTAGAACCAAATTTCATATCATTAACCACTCATTTCAGCAGTCCAAGTGCAGATAATCAACATCAACACTTATCAGAACGCAAAACAAAACGGATTAAAAAGTGTGTTACTTGTTGTGGATGCATCACTGCAattcttttgttatttattgTCATACTCATAATTCTAGCTTTTACTGTCTACAATGTAAAAGACCCTGAAGTTAAAATGAATGCTGTTACTCTTATCAGTGGAAATTTCAGCGGCGCTTCTAATACAGCTACTGTTTTGGCTGATATGTCTGTGAAGAATACAAATTCATTCACTTTCAGGTATGGAGCAGTTAATACTTCTGTTTTCTATAATGATATTGAAATTGGAGGGGGTGTAACGCCGCCTGGGAAAGCTAAGGCGCAAAGAACAGCGAGGTTCAACGTAACGTTGGTGCTTAATGCGAAACAACTTGTGGATAATCAAGAATGGATTACGGATATTAGAGATCAAGGTTTGAATTTTAGCACCTATACAAAGATTAGTGGAAAAGTGAAAATATTGAACATGTTTAAGAGGAAAGTTGATGTTGAGTTAAATTGTACTAGTCAATATAATATCACTACTAGGTCAATCACAAGTGGTGATAATTGTGTTGGATATGTTAatatttag 678 0.3392 MAYTQREQFKPVEPNFISLTTHFSSPSADNQHQHLSERKTKRIKKCVTCCGCITAILLLFIVILIILAFTVYNVKDPEVKMNAVTLISGNFSGASNTATVLADMSVKNTNSFTFRYGAVNTSVFYNDIEIGGGVTPPGKAKAQRTARFNVTLVLNAKQLVDNQEWITDIRDQGLNFSTYTKISGKVKILNMFKRKVDVELNCTSQYNITTRSITSGDNCVGYVNI 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00412 225 Pfam Late embryogenesis abundant protein 104 203 IPR004864 -
Tsu02g00412 225 Gene3D - 63 208 - -
Tsu02g00412 225 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 32 223 - -
Tsu02g00412 225 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 32 223 - -
Tsu02g00412 225 SUPERFAMILY LEA14-like 57 164 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00412 23 133 EF-hand Containing Proteins AT5G21130 28.099 3.85e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00412 - - gmx:100527705 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00412 02 3447499 3448623 Tsu02g00412 02 3447499 3448623 ECH