Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00407 ATGTTGTTTACCTCTTCTTCTCACTCTCTTTTTTCTCGTCAATCTTTTCTTCCAATTAAGCCTAAGCCTTTTCCTCGTCCTTTTCCAACCACCACTATTCGGATCTCTAATTCTCGTATCAATCCTCCAAACAACAGATTGAGTATACTGTGCTTTAGGCATGAGGAGCAACATTCTCCAGAAACGCCCAAACCCGATATTATAGACCACTGTCTTCTTGAGGAATTGGTGCAGCCTGAATCCAAGGACCCCGATGTCACCAAAAGAGACTGGAGGTCAATCCTTCCGAAGGCTGCAAATGAAGTATTCAATGGGATTGGTAATCGATGGGTTGTACCATGGTCTGCAATCACAATATTAAAAGTTATGCTTCTTTGGACATCAGCATTTTGGTTCATAGGATCTTGGATGATTCCTTTTGCAGCCCATATAACTGGCTTTAGCAAGGATTCTTTGACATTTAGAGGACAGGCACTATTTAGCCTCGTCACTGATGTAACCGAAGGATTAGCTGGAATTGCAATTCTTGTCCGCTGCCTCTCTCGGTTTCGTCCCCTTCCACCCGACTGGTTCAAGTTTAGCCCGAAAGGGAAATGGCATTTAGATGTCATCATGGGGTGTCTCATGTTTCCTCTTGTTAATCGGCTCTCTCAGTTCAACCTTGACATACTACCTATCTTACCATCAACACAGATCACCCTTTCAAGTGTTGAACAATCAATAAAAGCAAGGGATCCCGTGGCGATGTTATTGTACGCAATTGTAGTCACGGTCTGCGCTCCTGTGTGGGAGGAAATAGTTTTCCGCGGTTTTCTACTCCCATCTCTTACCAAATACATGCCTGTATGGTGTGCGATACTGATAAGTTCAGTTGCGTTTGCGCTTGCACATTTTAACATACAGAGGATGTTGCCACTTATATTTCTTGGGATGGTCATGGGTGTGATATTTACGCGGTCAAGAAATTTATTGCCATCAATGTTGTTGCATAGTCTTTGGAATGGATTTGTGTTTTTAGATTTGATGAAATAG 1032 0.4264 MLFTSSSHSLFSRQSFLPIKPKPFPRPFPTTTIRISNSRINPPNNRLSILCFRHEEQHSPETPKPDIIDHCLLEELVQPESKDPDVTKRDWRSILPKAANEVFNGIGNRWVVPWSAITILKVMLLWTSAFWFIGSWMIPFAAHITGFSKDSLTFRGQALFSLVTDVTEGLAGIAILVRCLSRFRPLPPDWFKFSPKGKWHLDVIMGCLMFPLVNRLSQFNLDILPILPSTQITLSSVEQSIKARDPVAMLLYAIVVTVCAPVWEEIVFRGFLLPSLTKYMPVWCAILISSVAFALAHFNIQRMLPLIFLGMVMGVIFTRSRNLLPSMLLHSLWNGFVFLDLMK 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00407 343 Pfam Type II CAAX prenyl endopeptidase Rce1-like 250 335 IPR003675 GO:0004222|GO:0016020|GO:0071586
Tsu02g00407 343 PANTHER - 41 341 - -
Tsu02g00407 343 PANTHER CAAX AMINO TERMINAL PROTEASE 41 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00407 Tsu-Chr2 3406713 3410882 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00407 K07052 - gmx:100816897 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00407 02 3406713 3410882 Tsu02g00407 02 3406713 3410882 ECH