Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00400 atgttgTTAGCTTTATGTTCAGCAAAACGAAGCAAGAGAAAGCACTACACACCATGCAAAAACATAGTCCTTTATTATCATGACATAATTTACAATGGAACAAATGCTGCTAATGCAACATCTTCAATAGTAGCAGCTCCACAAGGTGCTAATTTAACAAAATTGGCACCTCAATTCCACTTTGGTGACATGATAGTTTTTGATGACCCTATCACATTGGATAATAACCTTCACTCAAAACCAATCGGAAGAGCACAAGGCTTTTACATGTATGATACCAAAAATGCATACACTGCTTGGTTTAGTTTCACATTGATTCTTAATAGCCCTTATTATGAAGGAACCATAACTTTAGCTGGTGCTGACCCAACTATTAAGACAACTAGAGATATCTCTGTGACTGGTGGCACTGGTGATTTCTTTATGCATAGAGGAATTGCTACTCTTATAACTGATACTTTTCAAGCAAAACCAAGCAAGAGAAAGCACTACACACCATGCAAAAACATAGTCCTTTATTATCATGACATAATTTACAATGGAACAAATGCTGCTAATGCAACATCTTCAATAGTAGCAGCTCCACAAGGTGCTAATTTAACAAAATTGGCACCTCAATTCCGTTTTGGTGACATAATAGTTTTTGATGACCCTATCACATTGGATAATAACCTTCATTCAAAACCAATTGGAAGAGCACAAGGCTTTTACATTTATGACACCAAAAACACAATCACTGCTTGGTTTAGTTTCACATTGATTCTTAATAGCCCTTATTATGAAGGTACCATAACTTTAGCTGGTGCTGACCCAGCTCTGAAGAAAACTAGAGATATCTCTGTCACTGGTGGCACTGGTGATTTCTTTATGCATAGAGGAATTGCTACTCTTATAACTGATACTTTTCAAGGTGAAGCTTATTTTCGACTTCGAATTGAAATTAAGTTCTACGAGTGTtggtaa 963 0.3593 MLLALCSAKRSKRKHYTPCKNIVLYYHDIIYNGTNAANATSSIVAAPQGANLTKLAPQFHFGDMIVFDDPITLDNNLHSKPIGRAQGFYMYDTKNAYTAWFSFTLILNSPYYEGTITLAGADPTIKTTRDISVTGGTGDFFMHRGIATLITDTFQAKPSKRKHYTPCKNIVLYYHDIIYNGTNAANATSSIVAAPQGANLTKLAPQFRFGDIIVFDDPITLDNNLHSKPIGRAQGFYIYDTKNTITAWFSFTLILNSPYYEGTITLAGADPALKKTRDISVTGGTGDFFMHRGIATLITDTFQGEAYFRLRIEIKFYECW 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00400 320 PANTHER DIRIGENT PROTEIN 2 156 - -
Tsu02g00400 320 Pfam Dirigent-like protein 167 312 IPR004265 -
Tsu02g00400 320 Pfam Dirigent-like protein 19 156 IPR004265 -
Tsu02g00400 320 PANTHER DIRIGENT PROTEIN 156 320 IPR004265 -
Tsu02g00400 320 PANTHER DIRIGENT PROTEIN 2 156 IPR004265 -
Tsu02g00400 320 Gene3D - 6 162 IPR044859 -
Tsu02g00400 320 Gene3D - 163 315 IPR044859 -
Tsu02g00400 320 PANTHER DIRIGENT PROTEIN 156 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00400 Tsu-Chr2 3299699 3305361 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00400 - - lja:Lj4g3v3002360.1 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00400 02 3299699 3305361 Tsu02g00400 02 3299699 3305361 ECH