Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00389 ATGAAAGATAACCAGTCAAAGGAATCAATCAAGATAATTGACAGTCTGATTGATCCCGAAAATGCTGAAGAACTCCAAAGGACTAAAACAGATATCGAGACCTACATTACAAAAATCCAGAACCTTATTAAGaacgaaaatcaaaacaaaaaagatggGAACACCAGACGTTCTAGAAAAGAGGCCGAACTTATGGGACTAACTGAGGACTTATACAAGCAGTACCAGTCACTTTTTGCACAGTATGATTATGTTATTGGGAAAGTGGTTTCTCACAAAAGAAACAAGAAGACTTCGGTTTCTTCAGCTGACTCAGAGGAGTTCTTTTCCTCCGAGGAAGTAGATGGTAGTAATAGGAGAAGATCATCagagaaagaacaaaaacatGTATCCGACACTCTTAAGCAGGAACCTGATAGAGGTGATAATCTTAACCAAAATATTGAGGCAACAGAATCTGAAATACCATTAACTTCACTAATGGAAGAGGTGAAGAGCTTGAGCAACGATAAAATGGATCTAGAACTTCAAATTGAAAGCCAGGCGAATGAAGATAAACAACTAAGCATAAAGAATACTGAGCTACACAACCATGTCATGGAACTTGAATCTttgttgaaagaaaaacaaagtgtGATATCTGATCTGGAGGTGAAACTCGATAACAGTGAGGAACAAGCAAAGTCCAACATTGTAAAATTGATGGCTCAAGTCAATGATCTTGCACTTGAGACGAAATCTCTGAGGACCCAAAAAGATGagatggaagaaaaaataaaatgtgataaaaaTGAAGCGTCTACCGAAAGAGAGGACTTGATGGAGAAGCTTAACATTATGCAGCAGAAGTTAGATTCTCAAGGGAATCTGAACAACGAATTAGAAACTCTGAAGGCGAGTTTAGCTGAAACGAAATCAACTGAACAGACTATGATGGAAGAGAAAAAGGATCTTGTTGCGAGGTTAAATGACATGGAACTCGAATTGGAAATTCAAAGAAACCAGACAAATAAGTTGGAAGAGCAGTTAAGAGATAAAAGTTACGAGATTAAACAGCTGATGAATGAAAACAAGTCGCTGCAGGACAGAAACGATGAACTGAAAGCAGCAATGACAGAAAGAAGGGAAGAGATATCTAGTTTTTTGAGGGAAAATAACAGCGATGAAAATGGAACTTCGATGGAGATCATGGCTTTAAAAGCTGAAGTTAATGAAATGAGACTAGATTTAGACAATTTGAATGAACAGAAAACAAAGTTGGAGATCCAAAACGAACGAAACCAGAAAGAATATGCAGAAAGCCTAGCAAAGATGGAAAACTTGAATACAAAGTTAACAACCCAGATAGAGGATCAAGAGAAAACTATAAAGGATCAGTTATCGACCATTGCTCGGATAAATGCAGAGCAAAAAGAAACCATACTCACGTCTCATAAGTTCAGGTTGAATCAGCGAATGGCAGAAAGGAAGATGGAAGAATTGGCAGAAAAGGTGAAGAGGAAAATGGAAGACAATATCCGCTTGTTGCACCAGCGGATCCACGTGGCAGAACAACTgaacaatgaaaacaaaaacagtTGCAAATTAACAAAGATGAGGTATGAGCAAGAGAACAAAATTCTTGGAGAAAAAGTTGctttttatgaaaatgaattAGAAAAGCTTAAAGGGGATGCTACTGATAGTGAAGTAACACACTCACCAGTGATTGATCTAAAGGGTTTTGAATTTGAGTCTGCTCTAAATGGATTAGATGCAGCAGTTGCAAAAGTCGAAGAACATAGAGAATGTGTTGTGAACAATGTGTCTAAAATGCTATATGAGGTTCAGTTTGCTAAGGATTGGATAAAGACTATGAACGTCGAAATGAAACAACTAAAAGACAATGTGGATTATCTAACAACGTTGTTGAATCAAAAAGAGGAGCAGGAATTATTGTTGAGAGACAAGGTATGGAATTTAGAAGCTACGGTGAGTAAAGAAGGAGGAGAAAAACTGAACTTGACAAATGCAGTAAACCAGCTTGAAAAGAAAGTGGGGAAATTGGAAAAGAATCTGAAAgagaaggatgaagatttggatAGCCTTGGAGAGAAAAAGAGGGAAGCAATAAGACAACTTTGTTTGGTTGTTGAGTTTCATCGCGACCGTTCTTTTCATTCAATCTTCagattcttcatcttcctcttttCAACTCTCACAGTTGAAGCCTTGAAGAAGCTTTCCAGTTTCAGATTTTGGATTCGATCAGATCAACTTAATCTGCTTTCAAACTCAAATCACTCACcTCCTCACTTCCTGGAATCTACATGGTGA 2316 0.3528 MKDNQSKESIKIIDSLIDPENAEELQRTKTDIETYITKIQNLIKNENQNKKDGNTRRSRKEAELMGLTEDLYKQYQSLFAQYDYVIGKVVSHKRNKKTSVSSADSEEFFSSEEVDGSNRRRSSEKEQKHVSDTLKQEPDRGDNLNQNIEATESEIPLTSLMEEVKSLSNDKMDLELQIESQANEDKQLSIKNTELHNHVMELESLLKEKQSVISDLEVKLDNSEEQAKSNIVKLMAQVNDLALETKSLRTQKDEMEEKIKCDKNEASTEREDLMEKLNIMQQKLDSQGNLNNELETLKASLAETKSTEQTMMEEKKDLVARLNDMELELEIQRNQTNKLEEQLRDKSYEIKQLMNENKSLQDRNDELKAAMTERREEISSFLRENNSDENGTSMEIMALKAEVNEMRLDLDNLNEQKTKLEIQNERNQKEYAESLAKMENLNTKLTTQIEDQEKTIKDQLSTIARINAEQKETILTSHKFRLNQRMAERKMEELAEKVKRKMEDNIRLLHQRIHVAEQLNNENKNSCKLTKMRYEQENKILGEKVAFYENELEKLKGDATDSEVTHSPVIDLKGFEFESALNGLDAAVAKVEEHRECVVNNVSKMLYEVQFAKDWIKTMNVEMKQLKDNVDYLTTLLNQKEEQELLLRDKVWNLEATVSKEGGEKLNLTNAVNQLEKKVGKLEKNLKEKDEDLDSLGEKKREAIRQLCLVVEFHRDRSFHSIFRFFIFLFSTLTVEALKKLSSFRFWIRSDQLNLLSNSNHSPPHFLESTW 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00389 771 Coils Coil 157 184 - -
Tsu02g00389 771 Coils Coil 25 45 - -
Tsu02g00389 771 Coils Coil 484 519 - -
Tsu02g00389 771 PANTHER COP1-INTERACTIVE PROTEIN 1 28 720 - -
Tsu02g00389 771 Coils Coil 287 377 - -
Tsu02g00389 771 Coils Coil 396 469 - -
Tsu02g00389 771 MobiDBLite consensus disorder prediction 93 152 - -
Tsu02g00389 771 Coils Coil 531 565 - -
Tsu02g00389 771 Coils Coil 199 283 - -
Tsu02g00389 771 Pfam KIP1-like protein 14 83 IPR011684 GO:0003779
Tsu02g00389 771 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 28 720 - -
Tsu02g00389 771 MobiDBLite consensus disorder prediction 112 139 - -
Tsu02g00389 771 Coils Coil 665 706 - -
Tsu02g00389 771 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 5 89 IPR011684 GO:0003779
Tsu02g00389 771 Coils Coil 623 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00389 Tsu-Chr2 3220697 3228576 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00389 - - mtr:MTR_8g099265 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00389 02 3220697 3228576 Tsu02g00389 02 3220697 3228576 ECH