Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00388 ATGGTGAAACATAACTTGAGAGAGTCTATAAAATCCCTGTTTGGAAGTCACATTGATCCTGATAAAGAAGAGCAGCTCCGAGGTGCTAAAACAGAAActgaagaaaaagtgaaaagGATATTGAAACTTATTAAAGAGGACAACCCTGAAGAGGATGGTACCACAGCAGAAATTTTGAAGAAGGAACCACTTGCTGAATTGATTGAGGATTTCCACAATCAATACCAATTGCTTTATACACAATATGACAATCTGACAGGCGAGTTAAAGAATAGGATCAAGGGCAAACGAGAAAAAGGAAGTTCTTCATCTAGCTCTGACTCGGATTCGGATTCAGATTATTCTTCAAAGGGCAGAGACAGCAAAAATGGACAACTGCAAAGTGAATCTCAAAAGATAATTGATGGATTAAAGCAAGAACTTGAAGTGGTGCATCAGGAAGTCGCCGAGTTAGATCAGAAGTTGACAGTTACACGTGAAGAGAAGGAGGACATAAATTCAAAACACCTTGCAGCCCTGAGCAAGATACATGAAGCAGACAAAATTAATATGGATTTGAAAACTGATGCTGAGGCATTAGAGATTCAAAGATCAAAACTTTTGGCTGAGAATACTGAACTAAATAAGCAACTGGACATTGCTGGTAAAGTCGAAGCTGAACTGAGTCAAAGATTGGAGGATATGAAGATAGAAAACAATAGCTTGGCCACGGAGAAAGAGGCAGCTCTCCAACAGTTTGACGAGGAAAAGAAAATTACAGATGACCTGAGAAACCTTGTTGATCAACTGAAAGATGATAAGTTAGTAATTGCGAAAGAATTACAAGCAGTAACAGATGAACTTTCTAGTCTGAAGCAGACATTGAAAGATACAGAAGAGCAAATAACAACTATAAGCCACAATCTGGAGGTCACAAAGGAAGAGAACGAATCATTAAAAGCAGAACTTTCACAGGCTTCAAATGAGGTTCAGCTCTCTCAGAACAGAATACAAGAATTTGTATCTGAATTAAGTCAGTTAAAGGAGAAACTTGATGAGAGAGACAGGGAAGTTTCGACCCTCACTCAGATGCATGAAGGTCATCAGAATGAGTCCTCAAATCTAATCAGGGAACTAGAGGCACGAATTACAAATCTGGGGATGGAATTAGAATCACTGCAAAACCAGAAAAAAGATATGGAGGAGCAACTTAAGAGATGCACCACTGATGCAAGGGAACTGGGAGAGCATAATTTGGGGTTGCGAAACCAAATTTCAGAACATGAAATGAAGTCCAAAGAAAGAGAAGAGGAGCTATCTGCTGTCATGAAGAAACTCAAAGATAACGAGAATGAATCATCTTCCAAAATATCAGATTTGACATCTCAAATAAACAATTTGCAGGCTGATATAAGTTCATTGCATGCTAAGAAAAATGAACTGGAAGagcaaataattttcaaaagtaATGAAGCAGGGGAACTGGGAGAGCACAATTTAGGGTTGCGAAACCAAATTTCAGAACTTGAAATGAAGTCCAAAGAAAGAGAAGAGGAACTATCTGCTATCATGAAGAAACTCCAAGATAATGAGAATGAATCATCTTCCAAAATATCAGATTTGACATCTCAGATAAACAATTTGCAGGCTGATATAAGTTCATTACATTCTAAGAAAAATGAACTTGAAGAGCAGATAGTTTTTAAGAGTAATGAAGCAAGGGAGCTGGGAGAGCACCATTCAGGGTTGCGAAACCAAATTTCAGAGCATGAAATGAAGTCCAAAGAAAGAGAAGAGGAGCTATCTGCTATCATGAAGAAACTCAAAGATAATGAGAATGAATCATCTTCCAAAATATCAGACTTGACATCTCAGATAAACAATTTGCAGGCTGATATAAGTTCATTACATGCTAAGAAAAATGAACTGGAAGagcaaataatttttaaaactaatgaAGCAAGGGAACTGGGAGAGCACAATTTAGGGCTGCAAAACCAAATTTCAGAACTTGAAATGAAGTCCAAAGNAAGATAA 2016 0.3681 MVKHNLRESIKSLFGSHIDPDKEEQLRGAKTETEEKVKRILKLIKEDNPEEDGTTAEILKKEPLAELIEDFHNQYQLLYTQYDNLTGELKNRIKGKREKGSSSSSSDSDSDSDYSSKGRDSKNGQLQSESQKIIDGLKQELEVVHQEVAELDQKLTVTREEKEDINSKHLAALSKIHEADKINMDLKTDAEALEIQRSKLLAENTELNKQLDIAGKVEAELSQRLEDMKIENNSLATEKEAALQQFDEEKKITDDLRNLVDQLKDDKLVIAKELQAVTDELSSLKQTLKDTEEQITTISHNLEVTKEENESLKAELSQASNEVQLSQNRIQEFVSELSQLKEKLDERDREVSTLTQMHEGHQNESSNLIRELEARITNLGMELESLQNQKKDMEEQLKRCTTDARELGEHNLGLRNQISEHEMKSKEREEELSAVMKKLKDNENESSSKISDLTSQINNLQADISSLHAKKNELEEQIIFKSNEAGELGEHNLGLRNQISELEMKSKEREEELSAIMKKLQDNENESSSKISDLTSQINNLQADISSLHSKKNELEEQIVFKSNEARELGEHHSGLRNQISEHEMKSKEREEELSAIMKKLKDNENESSSKISDLTSQINNLQADISSLHAKKNELEEQIIFKTNEARELGEHNLGLQNQISELEMKSKXR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00388 671 Gene3D - 368 531 - -
Tsu02g00388 671 Gene3D - 532 670 - -
Tsu02g00388 671 Coils Coil 176 210 - -
Tsu02g00388 671 MobiDBLite consensus disorder prediction 13 32 - -
Tsu02g00388 671 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 89 IPR011684 GO:0003779
Tsu02g00388 671 Gene3D - 264 357 - -
Tsu02g00388 671 Coils Coil 369 410 - -
Tsu02g00388 671 MobiDBLite consensus disorder prediction 14 32 - -
Tsu02g00388 671 PANTHER COP1-INTERACTIVE PROTEIN 1 481 567 - -
Tsu02g00388 671 PANTHER COP1-INTERACTIVE PROTEIN 1 562 647 - -
Tsu02g00388 671 PANTHER COP1-INTERACTIVE PROTEIN 1 1 485 - -
Tsu02g00388 671 Coils Coil 425 484 - -
Tsu02g00388 671 Coils Coil 218 245 - -
Tsu02g00388 671 Coils Coil 134 168 - -
Tsu02g00388 671 Coils Coil 274 357 - -
Tsu02g00388 671 Pfam KIP1-like protein 14 83 IPR011684 GO:0003779
Tsu02g00388 671 Coils Coil 587 667 - -
Tsu02g00388 671 MobiDBLite consensus disorder prediction 93 131 - -
Tsu02g00388 671 MobiDBLite consensus disorder prediction 570 591 - -
Tsu02g00388 671 Coils Coil 492 572 - -
Tsu02g00388 671 PANTHER COP1-INTERACTIVE PROTEIN 1 1 485 - -
Tsu02g00388 671 PANTHER COP1-INTERACTIVE PROTEIN 1 562 647 - -
Tsu02g00388 671 PANTHER COP1-INTERACTIVE PROTEIN 1 481 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00388 Tsu-Chr2 3218491 3220642 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00388 - - mtr:MTR_8g099275 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00388 02 3218491 3220642 Tsu02g00388 02 3218491 3220642 ECH