Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00374 ATGAACAGAGAAACCGAATTGGTTGAACTTTGCATTAACGCAGCTTGTAAAAGCAGAGAAACCGTTGAAAAATGGCGGTTACAGAAACGATCTCTCGATCGCTTACCTTCTCATCTCGCCGATGCTCTCCTCCGCCGCCTCATCACTCGCCGTCTCCTCCACCCCTCCCTCCTCGAGGTTTTCAAACATAGTGCGGAAGAGGTTGATGTAAAAGGTGATAACTCTGTAGATGCAGAATGGATGGCATATTTGGGAGGATTTCGCCATTTGCGTTATTTGAACATTGCTGAATGTTATCGAATCAATTCTTCAGCTCTTTGGCCTATCACAGGAATGAATAGTCTTAAAGAGTTGGATCTATCTAGATGCTCCAAAGTTAATGATGCTGGAATTAATCATATCCTTTCTGTTCCTAATTTGGAGAAGTTGCACATTTCGAAAACAAGCGTTACTGCCAAAGGAGTCAAGCTTCTTGCCTCTCTTAAAAACTTGTCTCTTCTTGACTTGGGTGGTTTGCCTGTCGACGATGAGTCTTTAGCTTCCTTACAgGTACTGAAAAATCTACAACACATTGAACTCTGGGGTAGTAAAATATCAAACAAAGGTGCTGTTGTTCTTAACACATTCCCCAAGTTAACCCATCTAAATCTGGAATGGACCAGCGTCACAAAATTGCCTAATTTATCATCTCTTGAATGCCTCAACATGAGTAATTGTACTATTGACTCTATTCATGAAGATGATAAAGCTCCTTTGACAAAGCTTATTTTCTCTGGGTCTACATTCCTGAATGAAGCTGGAACCTTATTATATGCAAATACAAGTAACCTGTCCTTTCTGGACGTGGCCCATACCGGTCTTGACAAATTCTTCTTCTTAAGTAAATTGAAAGTAATAGAACATCTCAATCTCAGATCATGTATGATGGATGATAATTCAGTTGAGATGGTTGCATGTATTGGTGGAAAGTTGAAAAGTTTGAATCTGAGTGGTACTTGGGTTAGCTCTGCTGGAATAGGGATTTTAGCTGGACATGTTCCCAATCTTGAAATTCTATCACTATCTCAGACATCAGTGGAAGATACTGCCCTCCCATTTATCAGCTTGATGCCTTCATTGAAGGTTGTTGATCTGAGCAATACAAATATTAAAGGGTTTTTGCACCAGGGAGGGACTGACTTGGACTCACTCTCTCTAACGGCCCTTCAAAATCTGAAACAATTAGAAAGGCTGAATTTGGAGCACACTCGAGTCACCGATGAAGCTTTATTCCCTTTATCCAGCTTCCAAGAGCTGAGATATTTATCTCTTAAAAGTCCTTCACTCTCAGACATCTCACTTTACCATCTATCATCAGTTCCTAAATTGACAAAGCTTAGTATATGTGATGCGGTATTGACAAATTGTTCTCTTGATAAGGTTAAGGCTCCTGAAAGTCTGAAACTGATAGACCTCAGTGGTTGTTGGCTCTTAACCAAAGATGCTATCTTATCATTCAGTAGAAATCATCCACAGATTGAAGTAAGGCATGAACTTGTTGCGGTACTTCCTTTTGAAGAAAACGGACGTCAGCATTCATCTCGATTAACTTCAAGGACTATGCAAACAGCTAGGAAGAAAGAACAAACGTCCTTATCTCCATATTTTTTAGATCAAAGGGTGAAATATAGCAGAGATGAGTTACTTGCATTGCAGTTTATGTCTCTGCCTCTTGCATCAAATAGTGAGAGAGACAACTCAATACTTGAGAAACAATTGGATTGA 1764 0.3991 MNRETELVELCINAACKSRETVEKWRLQKRSLDRLPSHLADALLRRLITRRLLHPSLLEVFKHSAEEVDVKGDNSVDAEWMAYLGGFRHLRYLNIAECYRINSSALWPITGMNSLKELDLSRCSKVNDAGINHILSVPNLEKLHISKTSVTAKGVKLLASLKNLSLLDLGGLPVDDESLASLQVLKNLQHIELWGSKISNKGAVVLNTFPKLTHLNLEWTSVTKLPNLSSLECLNMSNCTIDSIHEDDKAPLTKLIFSGSTFLNEAGTLLYANTSNLSFLDVAHTGLDKFFFLSKLKVIEHLNLRSCMMDDNSVEMVACIGGKLKSLNLSGTWVSSAGIGILAGHVPNLEILSLSQTSVEDTALPFISLMPSLKVVDLSNTNIKGFLHQGGTDLDSLSLTALQNLKQLERLNLEHTRVTDEALFPLSSFQELRYLSLKSPSLSDISLYHLSSVPKLTKLSICDAVLTNCSLDKVKAPESLKLIDLSGCWLLTKDAILSFSRNHPQIEVRHELVAVLPFEENGRQHSSRLTSRTMQTARKKEQTSLSPYFLDQRVKYSRDELLALQFMSLPLASNSERDNSILEKQLD 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00374 587 Gene3D Ribonuclease Inhibitor 227 395 IPR032675 -
Tsu02g00374 587 PANTHER F-BOX/LRR-REPEAT PROTEIN 13 1 579 - -
Tsu02g00374 587 PANTHER RECEPTOR-LIKE PROTEIN 14 1 579 - -
Tsu02g00374 587 SUPERFAMILY L domain-like 346 497 - -
Tsu02g00374 587 SMART LRR_CC_2 161 185 IPR006553 -
Tsu02g00374 587 SMART LRR_CC_2 405 429 IPR006553 -
Tsu02g00374 587 SMART LRR_CC_2 112 137 IPR006553 -
Tsu02g00374 587 SMART LRR_CC_2 430 453 IPR006553 -
Tsu02g00374 587 SMART LRR_CC_2 477 502 IPR006553 -
Tsu02g00374 587 Pfam Leucine Rich repeat 113 131 IPR001611 GO:0005515
Tsu02g00374 587 ProSiteProfiles Leucine-rich repeat profile. 211 232 IPR001611 GO:0005515
Tsu02g00374 587 SUPERFAMILY RNI-like 79 385 - -
Tsu02g00374 587 Gene3D Ribonuclease Inhibitor 145 226 IPR032675 -
Tsu02g00374 587 Gene3D Ribonuclease Inhibitor 19 144 IPR032675 -
Tsu02g00374 587 Gene3D Ribonuclease Inhibitor 396 510 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00374 - - gmx:100814174 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00374 02 3135538 3139255 Tsu02g00374 02 3135538 3139255 ECH