LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu02g00366	ATGATTCTAAACGTTTCCACTTCTTCCTTCTCTCGCACACTTCCTcacccttcttcttcttcagtcAAACTCTCTGAAACTTGTTCCAACCGTAACACCAACGCTTCTTATCCTCTTCTCATTTTCACCAAACCTTCTAAATTCATCAACCTCAAAGCTTCCGTTAGCGAAAGCCAAAATGAAACTTCCAACTCCAATTTATTGGATCAACAGTTTCTTCTCCGAGTTGCTTCCACTGCCAAAGACGCTGACGAGGCATTGCAGTTAATCGCCGATAACTCTTCCGCTAACGGTGGTGTAGTTTCTACCTCTGATTGTTGCTCTATTATTTCCGCTGCGCTTGATCGGAGTAATCATCAACTTgctttgtctattttctatgCCATGCGCTCCACTTTTCATCAAgTTGGTGAGGATGGTCCTTTAGTTGAGAGATGGAAGTGGTCTAGGCCAAATGCACGTGTTTATACATCGTTGATTCAAGGGTTGGCGGCATCTTTGAGGGTTTCGGATGCTCTTAGTGTGGTTAAATATATCTGTGAAGTGGGTGTGTCTCCTTCTGAGGAGGTTCCCTTTGGGAAGATAGTGAGGTGTCCTAGTTGTCGGATAGCTGTTGCAGTTGCACAGCCACAGCAAGGTATTCAGATAGTATCTTGTGCAAAGTGTCGCTACCAATACGAACTTGTTTCGGGAGACATAGTCAGCATTCAATCAGAAGAAATCAGCATGGACGTTACAGCATGGGAAAAGGGGTTAAGATTCCTGAAACTGATCAAGCAAGGCATTCCTTCTGCTGTTCACTCTATCGTGGTGCAGACCCCTTCTGGTATGGCTCGAACTCACAGATTTGCAACTGAGACAGTTGATCTACCAGCACAAGAAGGCAAAAGGGTAACTGTTGCTGTGGCAGCTCCATCAAATGTATATAGAATGTTGGGGCCCTTTAAATTAAGTTCAAGATCCCCGGATTTATATCCTGGTGAGGCTATGTGCATAACAAACCACAAAGATGGACGGGAATCACGTCTTGTAAGAGCCCCTAGAAAAGATGAAAATTCATCATTACTAGAACCTTCCATTCTCTTTCCACTTATTGCTTTGTTTGCCACCGGTGATGCTGCCTCTGGACTTGTTGACCCCAGCCTGCCTCAATTCCTATTAGTTGTTGCAGTTTCATCTCTTGCTGTTGGCTCTGCATTGAATTCCTTTGTTATTCCCCAGTTTAATCAGCTTCCGCAAGGATCAGTGGAAGTAACTGCTATCAAACAACGTCTTTTATCTCAATATGACATGCTTCAGTCGCGCATCAATGACCTAAAAGAAGCAGCTGAAAAAGAGgtttGGATGTTAGCCCGGATGTGCCAACTTGAGAATAAAATTTCAGCTGTTGGAGAACCTTCTTATCGGTGA	1410	0.4262	MILNVSTSSFSRTLPHPSSSSVKLSETCSNRNTNASYPLLIFTKPSKFINLKASVSESQNETSNSNLLDQQFLLRVASTAKDADEALQLIADNSSANGGVVSTSDCCSIISAALDRSNHQLALSIFYAMRSTFHQVGEDGPLVERWKWSRPNARVYTSLIQGLAASLRVSDALSVVKYICEVGVSPSEEVPFGKIVRCPSCRIAVAVAQPQQGIQIVSCAKCRYQYELVSGDIVSIQSEEISMDVTAWEKGLRFLKLIKQGIPSAVHSIVVQTPSGMARTHRFATETVDLPAQEGKRVTVAVAAPSNVYRMLGPFKLSSRSPDLYPGEAMCITNHKDGRESRLVRAPRKDENSSLLEPSILFPLIALFATGDAASGLVDPSLPQFLLVVAVSSLAVGSALNSFVIPQFNQLPQGSVEVTAIKQRLLSQYDMLQSRINDLKEAAEKEVWMLARMCQLENKISAVGEPSYR	469

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu02g00366	469	Coils	Coil	422	442	-	-
	Tsu02g00366	469	Gene3D	Tetratricopeptide repeat domain	51	198	IPR011990	GO:0005515
	Tsu02g00366	469	MobiDBLite	consensus disorder prediction	1	25	-	-
	Tsu02g00366	469	PANTHER	PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN	1	469	-	-
	Tsu02g00366	469	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	152	186	IPR002885	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu02g00366	-		-	gmx:100781803	712.605

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu02g00366	02	3072542	3078126	Tsu02g00366	02	3072542	3078126	ECH