Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00354 ATGGATATTCTCTCTTCCTTCTCCCAACCTTTTCTCCTCGCCGTTACTGTAACTTCCCTCTGTTTCTTCATCGCTCTCTTCTCGTTCAGGAAATTCACGCCGTCACGCAAACACTGCAACTGCGCCTCCTCATCCGATTCCGACGCTGTTGCTGTGCCCTACTTGAACGGAGGTGTTTCTGAAATGATGGAGATCAGTCATTCTCCGGCGCCGGTTGTGTTGACTGATCGTCGTACTGGTTCTTCCATGATGGAGGAACTTGTTCCGGAGATTACAACGCACGCGCTTAGTTACTTGGATTATCCTAGTTTGTGTCGTCTTTCAATGACTAATTCTTTGATGCGAAAAGCTGCCAATGATGATAATGCTTGGAAAGCCCTCTATCACAAGGACTTCACTTTGGAACAAGATAGCGTTACACCAAGCAATGGGTGGAAGGCTTACTATGCTGCCACAAGAGCAATTGTGATTGTTAATACAGAATTCTTCAATATTGTTAGAGATAAATCCATTCTGGCAATGAGACGTTTTTGGCTAAATGCAGATTATGTGAAGTGCATCCATGCCTCAGGAGAACTTTTTTCTGGGTATAATTCAGTAATGCAGAGCTGGCAACTCATATTCAACTGGGAGCAAGGATTGAACTTTCAGGTTCGGGATGTACGTGCTCGGGTCTTGACAGACATGGCTTGGGTTACCATGAAAACATATGTTGACATGGATACAGGGCCGTTCAATGTGACTAATGTCTTTGAGTTCCATAGTGGACGGTGGTATATGGTTCATCATCACATTTCTGTGATGAATGGGGATTTGGAGCAACAAAATATGCATGGGTAA 840 0.4429 MDILSSFSQPFLLAVTVTSLCFFIALFSFRKFTPSRKHCNCASSSDSDAVAVPYLNGGVSEMMEISHSPAPVVLTDRRTGSSMMEELVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDSVTPSNGWKAYYAATRAIVIVNTEFFNIVRDKSILAMRRFWLNADYVKCIHASGELFSGYNSVMQSWQLIFNWEQGLNFQVRDVRARVLTDMAWVTMKTYVDMDTGPFNVTNVFEFHSGRWYMVHHHISVMNGDLEQQNMHG 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00354 279 PANTHER F-BOX PROTEIN SKIP8 1 279 IPR044260 -
Tsu02g00354 279 Gene3D - 146 277 - -
Tsu02g00354 279 SUPERFAMILY F-box domain 80 154 IPR036047 GO:0005515
Tsu02g00354 279 ProSiteProfiles F-box domain profile. 81 127 IPR001810 GO:0005515
Tsu02g00354 279 SUPERFAMILY NTF2-like 150 268 IPR032710 -
Tsu02g00354 279 Pfam SnoaL-like domain 158 269 IPR037401 -
Tsu02g00354 279 Gene3D - 73 125 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00354 - - gmx:100807571 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00354 02 2975726 2978978 Tsu02g00354 02 2975726 2978978 ECH