Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00345 ATGGCATTCTCTTCACTCACTTCAATTcctctttcatcttcttcttctctttacGCTCCTTCCATTTCTTCTCCATTTCGCTCATTTCCTCAATCAAACTTTCACCTAAACAGGAACAACAACAACTATTCCAACTTCTCCCTTAAAGCACAAACCCTAGACTTCACCGGTTCCTTCTTTGAAGGTGGATTGGGTTctggtgatgatgatgacgatgatgacGACGATGTTGTTATTCCAGGATTTGTTGATCttgaagaaagagaagaacCACAATGCCCACCCGGACTCAGACCTTACGAAACCATGGTGGTTTTGAGGCCTGACATGTCTGAGGATGAACGTCTTGCACTCACCCAGAAGTACGAAGAGCTTCTTGTTGCTGGAGGTGGCATGTATGTAGAGGTTTTCAACAGAGGTCTTATTCCACTATCATTTACCATCCAGAAGAAAAACAAGGAAGGAGAGTCCAACATCTATATGGATGGCATCTACCTCCTATTCACCTACTTCACGAAGCCCGAGTCCATAGGCGCCCTTGAGGATACACTATTGAGGGATGATGATGTTATCAGATCAACGACCTTTAAAATCAGGAAAAGAAGATATTAG 612 0.3856 MAFSSLTSIPLSSSSSLYAPSISSPFRSFPQSNFHLNRNNNNYSNFSLKAQTLDFTGSFFEGGLGSGDDDDDDDDDVVIPGFVDLEEREEPQCPPGLRPYETMVVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGLIPLSFTIQKKNKEGESNIYMDGIYLLFTYFTKPESIGALEDTLLRDDDVIRSTTFKIRKRRY 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00345 203 PANTHER 30S RIBOSOMAL PROTEIN S6 ALPHA, CHLOROPLASTIC 13 203 - -
Tsu02g00345 203 Pfam Ribosomal protein S6 100 197 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Tsu02g00345 203 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 13 203 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Tsu02g00345 203 SUPERFAMILY Ribosomal protein S6 97 200 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Tsu02g00345 203 Gene3D - 96 202 IPR014717 -
Tsu02g00345 203 Hamap 30S ribosomal protein S6 [rpsF]. 97 200 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00345 K02990 - sly:101249844 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00345 02 2926500 2929362 Tsu02g00345 02 2926500 2929362 ECH