Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00344 ATGGCTGAATCGAAGAAACGATGGACGGTAACATACACAAAACACGTCAAACAGAAACGCAAAGTTTACCAAGACGGATTCCTAGTGCTCAACGTTTCCACCGGCAAGTTATCGCTGTATGATGAATGCGAGAAACTGTTGGAGCGTAGGATCTTGAAGAACGACGAAACTGTTGAATCTGGTGAGAGTTTGACGTTTAACAGTCACCTTGTTGATATCGGTAGTCTCGACGGAGAAAACAAGCCTCAACCTCAACCTCATTTGAATGTTGATGTAAAACAAAAGAATGTTTCTAGATTCAGGACTCCTGACGTCAAAAGTAATGCAAAGGAGACTATTGTGCAGACACGGAAACCTCTCAGTCCGTcacaaaaaattatcaaagAATTTCAGattaaaaagagagaaattcTTAAGTACGAGTCACCAAAGATCAGTCATGAAACTCCAAAACCTAGTACAACAGAGTGGCAAGTTCTATACACCAGTCAAATGACTCAGAAGGCAAAGAAGTACCATGATGGTTTTGTAGAACTTGTGTTTTCCGGATCTCGAGGGGCACAGGTTAGGCTGTTTGATGCAAACAGGAATCTCTTAGACAGCAGGTTCCTTAAGAAAGATGACGTAATGAAACCTGGTGAATCAGTTACATTTGATACATATTTGGTTGACATTAGTGAGGATCAAGGAAGTCATACACCAGATTCCATTGTTAAGGGAGGTAATTGCACTAATGTACAAAGAATACAAAAGATAGACAGACAGCAAACTTCTCTGGACACTGATACCCATGTAACCGTTGGAAAACATGAATGGCAGGTCCTATACACAACACAATTAACTCAAAAAGCAAAGAAGTTTCATGATGGCTTTTTACAACTAGAATTGTGTGGATCCCTTGGGCGGCAGGTCATACTTTATGATTTGAGCAAAAGACCTTTAGAACGCAGGTTTCTAAAGAAAGATGAAGTTATAAGAGCTGGCGAATTATTATATTTTGCTGGACATTTAGTTGATGTCGGAGAACCTGAAGGTAGTCATCAATCTCCAGTGAAGTTGAGTGAACGAGGGACTGGTGGCGAAAATGTTGTTGAGAAGAGACAACTAAGACATGGAGAAAAGGCCTGTCACAATTTCTATCCATCTACTGCTAAAGGACAACCTCCGAGCCGGCCTTGTCTTCGGCAAGATACAGACTTGAACTCTCAATTTGCCGGGATAGAAGCGATAAAATCAAACAAGACAGTCCCAGTAGTCAAGCCTTTACGTGATGCCAATCAAATATTGTTCTTTTTACAAGACCCTAAGCCTCATGACTGTTATGTGAAAGGTGGCCGATCTTCCAATAGGTCATATCAAAATATTGTGGATAGGGAATCAACGGAGGCTGTGAAATCCCCTGATATTAGATCTACCAAAGCAGCATGCGATGGTGGTAGTTTCCAGTTTAGGGAGAATGTCAAAATGTCCAACCAGCCCTACTCAGACAAGAAAGCTCAGGAAAATATCGACGAGGCAAATTTTGACTTATTATTATCAAGTCCGGATGATCATTCTTCTTGCCCCATTTCCAATGAAGGAGAGACTGCTGAGGAGTTCTCGCATGAAAGGGAAGCATTCCCAAGCTTCGACCTTGGATTTTGA 1644 0.4075 MAESKKRWTVTYTKHVKQKRKVYQDGFLVLNVSTGKLSLYDECEKLLERRILKNDETVESGESLTFNSHLVDIGSLDGENKPQPQPHLNVDVKQKNVSRFRTPDVKSNAKETIVQTRKPLSPSQKIIKEFQIKKREILKYESPKISHETPKPSTTEWQVLYTSQMTQKAKKYHDGFVELVFSGSRGAQVRLFDANRNLLDSRFLKKDDVMKPGESVTFDTYLVDISEDQGSHTPDSIVKGGNCTNVQRIQKIDRQQTSLDTDTHVTVGKHEWQVLYTTQLTQKAKKFHDGFLQLELCGSLGRQVILYDLSKRPLERRFLKKDEVIRAGELLYFAGHLVDVGEPEGSHQSPVKLSERGTGGENVVEKRQLRHGEKACHNFYPSTAKGQPPSRPCLRQDTDLNSQFAGIEAIKSNKTVPVVKPLRDANQILFFLQDPKPHDCYVKGGRSSNRSYQNIVDRESTEAVKSPDIRSTKAACDGGSFQFRENVKMSNQPYSDKKAQENIDEANFDLLLSSPDDHSSCPISNEGETAEEFSHEREAFPSFDLGF 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00344 547 Pfam Protein of unknown function (DUF2439) 156 230 IPR018838 -
Tsu02g00344 547 Pfam Protein of unknown function (DUF2439) 270 348 IPR018838 -
Tsu02g00344 547 Pfam Protein of unknown function (DUF2439) 6 80 IPR018838 -
Tsu02g00344 547 MobiDBLite consensus disorder prediction 514 536 - -
Tsu02g00344 547 PANTHER ZINC FINGER GRF-TYPE CONTAINING 1 245 358 - -
Tsu02g00344 547 PANTHER ZINC FINGER GRF-TYPE CONTAINING 1 1 245 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00344 - - mtr:MTR_8g099725 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00344 02 2919000 2925301 Tsu02g00344 02 2919000 2925301 ECH