Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00342 ATGACAGCAGCAGCACATATTGCTCGAACAGTTGTTGGAATTATAGGAAATATAATCTCGGGCTTCTTGTTCCTGTCCCCAGTACCAACTTTTATTGAGATATGGAAGAAAGGATCAGTGGAGCAATTTTCACCAGCACCATACTTAGCAACACTTGCTAATTGCATGGTTTGGACATTGTACGGTCTACCCATGGTGCACCCGGACAGCGTGCTTGTGGTAACCATCAACGGCTCAGGCTGTGTGGTTGAGATCATATATGTCACGCTCTTCTTGATTTACTCTAACCGCAACAAAAGGCTCAAGGTCCTTCTGTGGCTAGTCGTTGAACTCATTTTCATCGCAACTCTTACCTTCGTCACATTGAGACTTGTCCACACCATCAAGAAACGTTCTGCAATTGTTGGTACCACCTGCATTATCTTCAACATCATGATGTATGCTGCACCTTTAGCCATCATGAAATTGGTGATCATGACTAAAAGCATTGAATATATGCCGCTTTCCATATCTCTTGCTTCCTTTGGAAATGGCGTCGCATGGACCACTTATGCTCTAATCGAATTCGACCCATTCATCactGTACCAAATGGGATTGGAACATTGTTTTCTGTGGCGCAACTGATTCTATATGCCACCTATTACAAATCCACGAAAATGCAGATAGCTGCTAGAAAAGCCAACAAAACAGAGGTGGACCTGTCACAGGTTGTGGTTGGCAATAGTGACCAACAATCCAAGACAAATCATTGA 753 0.4316 MTAAAHIARTVVGIIGNIISGFLFLSPVPTFIEIWKKGSVEQFSPAPYLATLANCMVWTLYGLPMVHPDSVLVVTINGSGCVVEIIYVTLFLIYSNRNKRLKVLLWLVVELIFIATLTFVTLRLVHTIKKRSAIVGTTCIIFNIMMYAAPLAIMKLVIMTKSIEYMPLSISLASFGNGVAWTTYALIEFDPFITVPNGIGTLFSVAQLILYATYYKSTKMQIAARKANKTEVDLSQVVVGNSDQQSKTNH 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00342 250 PANTHER RAG1-ACTIVATING PROTEIN 1 5 249 - -
Tsu02g00342 250 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 5 249 - -
Tsu02g00342 250 Pfam Sugar efflux transporter for intercellular exchange 11 98 IPR004316 GO:0016021
Tsu02g00342 250 Pfam Sugar efflux transporter for intercellular exchange 134 218 IPR004316 GO:0016021
Tsu02g00342 250 Gene3D - 7 101 - -
Tsu02g00342 250 Gene3D - 126 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00342 Tsu-Chr2 2908539 2911757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00342 3 250 Miscellaneous Gene Families AT4G10850 53.200 1.85e-92 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00342 K15382 - gmx:113000740 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00342 02 2908539 2911757 Tsu02g00342 02 2908539 2911757 ECH