Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00337 ATGATTCGATCCTTTCTAATTGTTCTCGGCATTATTTCATTAGGATGTCTATTTGAAAGTTCCATTGGGAAAGAGGAAGCAACCAAGTTAGGGACCGTTATTGGGATAGATCTTGGAACAACCTATTCTTGTGTGGGTGTATATAAGAATGGCCACGTTGAGATCATAGCCAACGACCAAGGTAACCGTATCACACCATCATGGGTTTCTTTCACTGACGATGAGAGATTGATCGGGGAGGCTGCAAAGAATCTTGCAGCTGTCAACCCTGAGAGGACCATCTTTGATGTCAAGAGACTTATCGGAAGAAAATTTGAAGATAAGGAAGTTCAAAGAGACATGAAGCTTGTTCCTTACAAGATTGTCAACAAGGATGGAAAACCATATATTCAGGTTAAAGTAAAGGATGGTGAGACCAAGGTGTTCAGCCCTGAGGAAATCAGTGCCATGATTCTTGGTAAGATGAAGGAAACCGCTGAAGCATTCCTTGGCAAGACTATTCGTGATGCCGTGGTCACTGTCCCTGCGTACTTCAATGATGCTCAGAGGCAGGCCACCAAGGATGCCGGTGTCATTGCTGGTTTGAATGTTGCTAGAATTATTAATGAACCCACCGCCGCTGCCATCGCTTATGGATTGGACAAGAAAGGTGGAGAGAAGAACATTCTTGTCTTTGATCTTGGAGGTGGAACTTTTGATGTCAGTATCTTGACAATTGATAACGGTGTTTTTGAGGTTCTTGCAACAAATGGTGATACTCATCTTGGAGGTGAGGACTTTGATCAGAGAGTGATGGAGTACTTCATTAAATTGATCAAGAAAAAGCATGGAAAGGATATCAGCAAGGACAACAGAGCACTTGGAAAGCTGAGGAGGGAGAGTGAGCGTGCCAAGAGAGCTCTTAGTAGCCAGCACCAAGTCCGTGTGGAAATTGAATCACTTTTTGACGGCGTTGATTTCTCTGAGCCACTTACCCGTGCTCGATTTGAAGAGTTGAACAATGACTTGTTCCGGAAGACAATGGGGCCTGTTAAGAAGGCAATGGACGATGCTGGGTTACAGAAGAGTCAGATTGATGAGATTGTTCTTGTTGGTGGAAGCACAAGGATTCCAAAGGTACAACAACTTTTAAAGGATTACTTTGAGGGAAAGGAGCCAAACAAGGGTGTTAACCCTGATGAAGCAGTTGCCTTCGGTGCTGCAGTTCAAGGAAGCATTTTGAGTGGGGAGGGTGGTGAAGAAACCAAAGATATCCTTCTCTTGGACGTTGCTCCTTTAACCCTTGGAATTGAAACTGTTGGGGGAGTGATGACAAAGTTGATTCCTAGAAACACTGTTATCCCTACCAAAAAGTCTCAGGTTTTTACCACATACCAGGATCAGCAGACAACCGTCTCCATTCAGGTGTTTGAAGGTGAGAGGAGTCTTACAAAGGATTGCCGGCTCCTTGGTAAATTTGATCTTTCTGGAATTCCACCAGCTCCAAGAGGTACCCCTCAAATTGAAGTGACCTTTGAAGTTGATGCCAATGGTATCTTAAATGTTAAGGCAGAAGACAAGGGCACTGGCAAATCAGAGAAGATCACCATTACAAACGAAAAGGGTCGTTTGAGCCAAGAGGAAATTGAACGGATGGTTCGTGAAGCTGAGGAGTTTGCCGAGGAAGACAAAAAAGTCAAGGAAAGAATTGACGCCCGGAATGCCCTAGAAACCTATGTTTACAACATGAAAAACCAAGTCAGTGACAAAGACAAGCTGGCAGATAAGTTGGAATCagatgaaaaggaaaaaattgagaCCGCCGTGAAGGAAGCATTGGAATGGTTGGATGACAACCAGAGTGTGGAGAAAGAAGAATATGAAGAGAAGCTTAAAGAAGTAGAAGCTGTTTGTAATCCCATCATCACCGCCGTCTACCAGAGATCAGGTGGTGCCCCAGGCGGTGGTGCATCAGGTGAGGACGAGGAGGATGAATCTCACGATGAACTCTAG 1992 0.4403 MIRSFLIVLGIISLGCLFESSIGKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVSFTDDERLIGEAAKNLAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVKVKDGETKVFSPEEISAMILGKMKETAEAFLGKTIRDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDNRALGKLRRESERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDYFEGKEPNKGVNPDEAVAFGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNEKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNALETYVYNMKNQVSDKDKLADKLESDEKEKIETAVKEALEWLDDNQSVEKEEYEEKLKEVEAVCNPIITAVYQRSGGAPGGGASGEDEEDESHDEL 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00337 663 ProSitePatterns Heat shock hsp70 proteins family signature 1. 36 43 IPR018181 -
Tsu02g00337 663 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Tsu02g00337 663 ProSitePatterns Heat shock hsp70 proteins family signature 2. 224 237 IPR018181 -
Tsu02g00337 663 Coils Coil 576 596 - -
Tsu02g00337 663 Gene3D - 216 390 - -
Tsu02g00337 663 Pfam Hsp70 protein 33 640 IPR013126 GO:0005524|GO:0140662
Tsu02g00337 663 CDD HSPA5-like_NBD 31 405 IPR042050 -
Tsu02g00337 663 ProSitePatterns Heat shock hsp70 proteins family signature 3. 361 375 IPR018181 -
Tsu02g00337 663 Gene3D - 567 641 IPR029048 -
Tsu02g00337 663 PANTHER LUMINAL-BINDING PROTEIN 19 648 - -
Tsu02g00337 663 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 413 570 IPR029047 -
Tsu02g00337 663 Coils Coil 610 630 - -
Tsu02g00337 663 PANTHER HEAT SHOCK PROTEIN 70KDA 19 648 IPR013126 GO:0005524|GO:0140662
Tsu02g00337 663 Gene3D - 34 405 - -
Tsu02g00337 663 Gene3D Actin; Chain A, domain 4 256 339 - -
Tsu02g00337 663 SUPERFAMILY Actin-like ATPase domain 31 215 IPR043129 -
Tsu02g00337 663 Coils Coil 542 562 - -
Tsu02g00337 663 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 412 566 IPR029047 -
Tsu02g00337 663 PRINTS 70kDa heat shock protein signature 170 190 - -
Tsu02g00337 663 PRINTS 70kDa heat shock protein signature 230 240 - -
Tsu02g00337 663 PRINTS 70kDa heat shock protein signature 390 410 - -
Tsu02g00337 663 PRINTS 70kDa heat shock protein signature 358 374 - -
Tsu02g00337 663 PRINTS 70kDa heat shock protein signature 32 45 - -
Tsu02g00337 663 PRINTS 70kDa heat shock protein signature 498 514 - -
Tsu02g00337 663 PRINTS 70kDa heat shock protein signature 82 90 - -
Tsu02g00337 663 PRINTS 70kDa heat shock protein signature 417 436 - -
Tsu02g00337 663 PRINTS 70kDa heat shock protein signature 60 72 - -
Tsu02g00337 663 MobiDBLite consensus disorder prediction 639 663 - -
Tsu02g00337 663 SUPERFAMILY Actin-like ATPase domain 218 409 IPR043129 -
Tsu02g00337 663 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 564 647 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00337 Tsu-Chr2 2871296 2874708 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00337 15 663 Miscellaneous Gene Families AT5G42020 92.615 0.0 1213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00337 K09490 - gmx:547839 1196.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00337 02 2871296 2874708 Tsu02g00337 02 2871296 2874708 ECH