Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00335 ATGAGGCTCTTGACAGTAGCTACTTGCAATCTCAACCAATGGGCTATGGAATTCGATTCCAACCTTAAACAAATCAAGCACTCCATCTCCAAAGCCAAACAAGCCGGCGCCGGCATCAGACTTGGACCGGAGCTCGAGATTCCTGGTTATGGCTGTGAAGACCACTTCTTAGAACTCGACACCATTAACCACtcATGGGAATGTTTGAAAGATATATTGGTTGGTGATTGGACAGATAACATAGTGTGTAGTATTGGAATGCCTATTATCAAAGGTTCTGAGAGATATAATTGTCAAGTTTTGTGTTTCAATCGAAAGATTATTATGATACGACCGAAGATGTGGCTTGCAAATGATGGTAATTATAGAGAACTTCGATGGTTTACTGCTTGGAAACAAAGGGATCAACTTGTGGATTTTCAGCTTCCTGGCCATATTTCTGATGCAATAGGCCAAAACTCAGTTCCATTTGGTTATGGTTTCGTTAAGTTTCGAGACACAGCTATTGCAGCTGAAGTTTGTGAAGAGCTTTTTACTCCATCACCCCCTCACGCTGAGCTTGCATTAAATGGGGTTGAAGTGTTTATGAATGCAAGTGGAAGTCACCACCAACTTAGAAAGCTTGATGTTCGTCTCCGTGCTTTTATAGGTGCCACTCATACTCGTGGAGGGGTCTATATGTACAGTAATCACCAAGGTTGTGATGGTGGTCGCCTTTATTATGATGGATGTGCCAGTGTTGTGGTAAATGGTGATGTCGTTGCACAAGGTTCCCAATTTTCTTTAAATGACATTGAGCTTGTGGTTGCTTCGATAGATCTAGATGTGGTTGCAAGCCTTAGAGGATCTTTAAGCAGCTTCCAAGAGCAAGCAAGTTGTAAAGCCAATGTTCCTTCAGTAGATGTACCATACAGTCTTTGTCTTCCTTTTGACCTTAAAATACGCCTTTCCGTTCCTCTTAAGATAAAATATCACtctcctgaggaggaaatagcatTCGGACCTGGTTGCTGGTTATGGGACTACTTACGAAGAAGTGGAGCATCTGGTTTTCTGCTCCCTCTTTCTGGCGGAGCAGACAGTTCCTCTGTTGCTGCGATTGTTGGGTGTATGTGCCAGCTGGTTGTGAAAGAAATTGCAAATGGGGATGAACAGGTTAAAGCTGATGCAATACGAATAGGAAACTATAAAGATGGACAGTACCCTACAGACAGCAGAGAATTTGCTAAACGAATATTTTATACGGTGTTTATGGGATCTGAAAACAGTTCGGAAATGACAAAGTCACGAGCCAAGGTACTGGCAGATGAAATTGGTTCATGGCACCTTGATGTTAGCATTGATGGAGTTGTATCTGCTCTTTTGTCATTGTTCCAAACACTTACAGGAAAGCGACCGCGCTACAAGGTTGACGGTGGATCTAATGTTGAGAATTTAAGCTTGCAAAACATTCAAGCTCGAATCAGAATGGTGCTAGCTTTCATGTTAGCGTCACTCTTGCCTTGGGTTCACAACAAACCTGGGTTTTATCTTGTCTTGGGTAGCTCCAATGTGGATGAAGGGTTACGTGGCTACTTGACCAAGTATGATTGCAGCTCAGCAGATATAAACCCTATTGGTAGTATAAGTAAGCAGGACCTTAGGTCATTCCTGCGATGGGCAGCCATCCATCTTGGTTACTCATCGTTGGCAGATATTGAAGCAGCTCCACCCACAGCCGAACTGGAGCCTATTCGTTCTAACTACAGTCAGCTTGATGAGGTTGATATGGGAATGACTTATGAGGAACTATCAGTTTATGGAAGACTAAGGAAAATTTTCCGTTGTGGTCCAGTTTCCATGTTCCAGAATCTATGTTACAGATGGGGTGCAAGATTGACTCCATCACAAGTGGCTGAAAAAGTAAAGCATTTCTTCAAGTATTATTCTATCAATCGACACAAAATGACCACCTTGACACCTTCCTATCACGCTGAGAGTTATTCACCAGAGGATAATAGGTTTGATCTTCGCCAGTTTCTTTATAATGCAAGATGGCCATATCAATTTCAGAAAATCGATGAACTAGTACAGGAGCTGGATGTCAAAGATGTTCAAGAATCAGGAAACCATGAGATAGCGGCAGCTCCATCAGATGTTGTTGGTGGTATGGGAGTTGCCGCAGCAGGTTCAGGCAATCCAAATGTTGGAATCTAA 2196 0.4217 MRLLTVATCNLNQWAMEFDSNLKQIKHSISKAKQAGAGIRLGPELEIPGYGCEDHFLELDTINHSWECLKDILVGDWTDNIVCSIGMPIIKGSERYNCQVLCFNRKIIMIRPKMWLANDGNYRELRWFTAWKQRDQLVDFQLPGHISDAIGQNSVPFGYGFVKFRDTAIAAEVCEELFTPSPPHAELALNGVEVFMNASGSHHQLRKLDVRLRAFIGATHTRGGVYMYSNHQGCDGGRLYYDGCASVVVNGDVVAQGSQFSLNDIELVVASIDLDVVASLRGSLSSFQEQASCKANVPSVDVPYSLCLPFDLKIRLSVPLKIKYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGNYKDGQYPTDSREFAKRIFYTVFMGSENSSEMTKSRAKVLADEIGSWHLDVSIDGVVSALLSLFQTLTGKRPRYKVDGGSNVENLSLQNIQARIRMVLAFMLASLLPWVHNKPGFYLVLGSSNVDEGLRGYLTKYDCSSADINPIGSISKQDLRSFLRWAAIHLGYSSLADIEAAPPTAELEPIRSNYSQLDEVDMGMTYEELSVYGRLRKIFRCGPVSMFQNLCYRWGARLTPSQVAEKVKHFFKYYSINRHKMTTLTPSYHAESYSPEDNRFDLRQFLYNARWPYQFQKIDELVQELDVKDVQESGNHEIAAAPSDVVGGMGVAAAGSGNPNVGI 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00335 731 Pfam NAD synthase 338 598 IPR022310 -
Tsu02g00335 731 SUPERFAMILY Carbon-nitrogen hydrolase 1 289 IPR036526 -
Tsu02g00335 731 TIGRFAM nadE: NAD+ synthetase 411 648 IPR003694 GO:0003952|GO:0004359|GO:0005737|GO:0009435
Tsu02g00335 731 Gene3D HUPs 327 695 IPR014729 -
Tsu02g00335 731 CDD GAT_Gln-NAD-synth 5 292 - -
Tsu02g00335 731 Hamap Glutamine-dependent NAD(+) synthetase [nadE]. 4 680 IPR014445 GO:0003952|GO:0005524|GO:0009435
Tsu02g00335 731 PANTHER NH 3 /GLUTAMINE-DEPENDENT NAD + SYNTHETASE 1 730 IPR003694 GO:0003952|GO:0004359|GO:0005737|GO:0009435
Tsu02g00335 731 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 319 661 - -
Tsu02g00335 731 Pfam Carbon-nitrogen hydrolase 5 281 IPR003010 GO:0006807
Tsu02g00335 731 Gene3D - 1 304 IPR036526 -
Tsu02g00335 731 PIRSF NADS_GAT 1 682 IPR014445 GO:0003952|GO:0005524|GO:0009435
Tsu02g00335 731 CDD NAD_synthase 326 649 IPR003694 GO:0003952|GO:0004359|GO:0005737|GO:0009435
Tsu02g00335 731 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 4 274 IPR003010 GO:0006807
Tsu02g00335 731 PANTHER GLUTAMINE-DEPENDENT NAD(+) SYNTHETASE 1 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00335 Tsu-Chr2 2837762 2844575 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00335 K01950 - gmx:100804904 1382.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00335 02 2837762 2844575 Tsu02g00335 02 2837762 2844575 ECH