Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00264 ATGGCTACTGGTGTCTGTTTCAACCTCATCTTTTCAGCTTCACTGTTCCTCCTTCTTCTTCCAGATTGTTGCTCTGGTAGTTTCATTGGGATATGCTATGGAAGAAATGCTGACGACCTACCGACACCCGACAAGGTGGCACAGTTAGTTCAACTTCATAAAATGAAATATGTTAGGATTTATGATTCTAATGCACAAGTCCTAAAGGCCTTTGCAAAAACTGGAGTTGAACTTATGATTGGTGTTCCAAATTCAGATTTGCTCTCATTCTCCCAATACCAATCTAATGCCGACGCTTGGTTGAAAAACAGTGTCCTTCCTTATTATCCAGCCACAAAGATCACATACATAACTGTTGGTGCTGAAGTCACAGAAAGTTCCTATAATACATCTTCATTGGTAGTGCCTGCCATGACTAATGTACTAACAGCACTCAAAAAACTAGGACTGCACAAAAAGATAAAAGTTTCGAGTACTCATTCGCTTGGTGTTCTGTCGCGATCGTTCCCGCCTTCAGCTGGTGCTTTCAATAGTAGCCATGCACATTTCCTGAAGCCAATGCTAGAATTTCTCGCTGAAAATCAATCGCCTTTTATGATTGATATATATCCTTATTATGCTTACCGGGATTCACCGAATAAAGTGTCTTTAGACTATGCCCTTTTTCAGGCATCGTCGGAAGTTATTGATCCAAACACTGGTTTGTTGTACACAAACATGTTTGATGCACAGATTGATGCTATTTACTATGCACTCATGGCTCTAAATTTTAGAACAATTAAGGTCATGGTCACCGAAACAGGTTGGCCTTCAAAAGGGTCGCCTAAGGAAAAGGCTGCAACTCCCGATAATGCACAAACATATAATACTAATCTCATAAGGCATGTTATTAATAATACCGGTACTCCTGCGAAGCTGGGGCAGGAGCTAGATGTTTACATTTTCTCACTGTTTAATGAAAATAGGAAGCCCGGTTTAGAATCAGAGAGGAACTGGGGATTATTTTATCCAGATCAGACAAGTGTGTATAATCTAGATTTCACCGGACGGGGTGGTGTTGATATGACTACAGCTGCGAATGTAACCCGGTCAAATAGAACATCATGGTGCATTGCTTCTAGCAAAGCCTCAGAAATTGATTTGCAGAATGCTTTGGATTGGGCATGTGGTCCTGGCAATGTGGACTGTACTGCTATCCAGCCTAGCCAGCCTTGTTTCGAGCCGGATAATCTAGCTTCACACGCATCTTTTGCTTTTAATAGCTATTACCAGCAAAATGGGGCCTCTGATGTTGCTTGTAGTTTCGGTGGTACAGGTGTAAAGGTCGACAAGGATCCAAGCTATGACAACTGCATCTACATGAAAGATGGCAATAATAAAACTTCAGGAGGTAATGCAAGGGCGATGTCGTCAACTTCATCCTCTCAACGGGAAGGAAGATATTCTTCAATTTCTATGTACCTTCTTGTAACTTGTCTCTTCATTCTACTGAATATTCAGCAATCCTGA 1509 0.4135 MATGVCFNLIFSASLFLLLLPDCCSGSFIGICYGRNADDLPTPDKVAQLVQLHKMKYVRIYDSNAQVLKAFAKTGVELMIGVPNSDLLSFSQYQSNADAWLKNSVLPYYPATKITYITVGAEVTESSYNTSSLVVPAMTNVLTALKKLGLHKKIKVSSTHSLGVLSRSFPPSAGAFNSSHAHFLKPMLEFLAENQSPFMIDIYPYYAYRDSPNKVSLDYALFQASSEVIDPNTGLLYTNMFDAQIDAIYYALMALNFRTIKVMVTETGWPSKGSPKEKAATPDNAQTYNTNLIRHVINNTGTPAKLGQELDVYIFSLFNENRKPGLESERNWGLFYPDQTSVYNLDFTGRGGVDMTTAANVTRSNRTSWCIASSKASEIDLQNALDWACGPGNVDCTAIQPSQPCFEPDNLASHASFAFNSYYQQNGASDVACSFGGTGVKVDKDPSYDNCIYMKDGNNKTSGGNARAMSSTSSSQREGRYSSISMYLLVTCLFILLNIQQS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00264 502 SUPERFAMILY (Trans)glycosidases 29 347 IPR017853 -
Tsu02g00264 502 ProSitePatterns Albumin domain signature. 16 40 IPR020857 -
Tsu02g00264 502 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Tsu02g00264 502 Gene3D Glycosidases 28 352 - -
Tsu02g00264 502 Gene3D - 363 466 - -
Tsu02g00264 502 Pfam X8 domain 369 439 IPR012946 -
Tsu02g00264 502 Pfam Glycosyl hydrolases family 17 29 347 IPR000490 GO:0004553|GO:0005975
Tsu02g00264 502 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 13 8 469 - -
Tsu02g00264 502 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 469 IPR044965 GO:0004553|GO:0005975
Tsu02g00264 502 SMART X8_cls 368 453 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00264 Tsu-Chr2 2249017 2251990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00264 22 497 Glycoside Hydrolase AT5G56590 72.234 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00264 - - gmx:100794295 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00264 02 2249017 2251990 Tsu02g00264 02 2249017 2251990 ECH