Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00183 ATGGGCTCTTCTTGGTTAGCACTACCCTCATTCTCCTCTTTCAACACCAACCGTTTCATTGTTCGTTCAAATTCCGATTCTTATAACCGCACAAATCACTCTCACGGAATCCAACGCCGTTGGATTGATGCACAATTCGATCGATCCCTCGCATCTCAACATAGATTCACCGTAGCGTCGTATAACATACTTGCAGATAGAAATGCTTCTCAACACGCTGATTTATACGATAACATTCCTTCTCGTTACATCAATTGGGATCGTCGTCAAAAAATTCTCTCCGACGAACTCTTTCAATGGAATCCTGATATTATCTGTTTACAAGAGGTGGACAAGTATGTTGAACTCTCGAATATTTTAGTTAAAGCCGGATATGCAGGATCTTATAAGAGACGCACCGGAGATACATCTGATGGTTGTGCAATGTTTTGGAAAGCTGATAAGTTCCAGGCATTAGATGAAGAGAGTATTCAATATAAGGACATTGGTCTTCGTGATAATGTTGCTCAACTTCTAGTTTTTGAGATGCGTGGATCTAATTCAAGAAGACTAGTGGTTGGTAACATCCACGTACTTTATAACCCAAACAGGGGAGAAGTTAAATTAGCCCAAATTCGTTTTCTCTCATCAAAAGCACAGACCCTCTCAGAGAAATGGGGTAATGCACCTGTAATCCTAGCTGGTGACTTTAATAGTACTCCTGAGAGTGGAATATACAAGTTTTTGTCATCATCTGAGCTTAATATCAAGCTATATGACAGAAAGGTGTTATCTGGACAGAAACGATGTCGTCCTGCTcaagttttaggcgagaaaaaagaaACAGTTGGTCCATTTAATTTACTCGATGGATTATTGGACTGCTGGACAGATGAAGAGGTAAAAACTGCAACGGGTGATTCTAAGTGTCACTTGGCTGTGCATCCATTAAAGCTGAATAGTTCGTATGCCACAGTCAATGTACCTTATCCTTCTGTAGCCTGTTTATTTATATACTAA 999 0.3914 MGSSWLALPSFSSFNTNRFIVRSNSDSYNRTNHSHGIQRRWIDAQFDRSLASQHRFTVASYNILADRNASQHADLYDNIPSRYINWDRRQKILSDELFQWNPDIICLQEVDKYVELSNILVKAGYAGSYKRRTGDTSDGCAMFWKADKFQALDEESIQYKDIGLRDNVAQLLVFEMRGSNSRRLVVGNIHVLYNPNRGEVKLAQIRFLSSKAQTLSEKWGNAPVILAGDFNSTPESGIYKFLSSSELNIKLYDRKVLSGQKRCRPAQVLGEKKETVGPFNLLDGLLDCWTDEEVKTATGDSKCHLAVHPLKLNSSYATVNVPYPSVACLFIY 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00183 332 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 3 26 319 - -
Tsu02g00183 332 Gene3D Endonuclease/exonuclease/phosphatase 28 330 IPR036691 -
Tsu02g00183 332 Pfam Endonuclease/Exonuclease/phosphatase family 59 242 IPR005135 GO:0003824
Tsu02g00183 332 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 26 319 - -
Tsu02g00183 332 SUPERFAMILY DNase I-like 50 248 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00183 Tsu-Chr2 1568122 1571991 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00183 49 244 EF-hand Containing Proteins AT5G54130 27.982 2.73e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00183 - - gmx:100779393 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00183 02 1568122 1571991 Tsu02g00183 02 1568122 1571991 ECH