Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00177 ATGCTGTATACAGATTTCAAGAAAGCTTCGCCTGAGGATAAGTCAAGTTTGTTTAATGCCTTGCTTAAGGGGTACCAGGAAGAGGTTGATAATCTTACAAAAAGAGCAAAGTTTGGAGAAAATGCCTTCCTTAACATCTACCAAAAGTTGTATGAAGCCCCAGATCCTTATCCAGCTCTTGCTTCAGTTGCTGAGCAAGATCTCAAGATGTCTGAGCTAGAATCCGAGAACCGGAAAATGAAAGTTGAGCTTGAGGAATTTAGAACAGAAGCAACTCACTTGAAGAATCAGCAGGCCACAATACGAAGACTTGAAGAGCGAAGTAGGCAATTAGAACAACAGATGGAAGAGAAAGTAAAAGAAATTGTGGAGATTAAGCATCGCAACCTAGCAGAAGAGAACCAGAAAACattagaaattttaaaagaaagGGAACAATTACTACAAGACCAGCTGCAGAGTGCTAAAGAAAGTGTTTCAAATATGAAGAAATTACATGAGCTTGCACAAAACCAGTTGTTTGAACTCCGTGCTCAGTCTGAGGAAGAGAGGGCAGCAAAGCAAGCAGAGGCCAATCTGCTGATGGATGAAGTTGAACGAGCACAAACAATGCTTCTTGGTTTGGAGAGAGAGAAGGGGGTACTTCGATCTCAGTTACAAACAGCAAATGAAGATTCTGAAAATAAGAAGAGCATCCTTTTAATACATATTCCAATCTTGGGTTATAATTCAATTGAGGCTGAAGACTGGGAAGCGGCCACAAGTGGGGAGGAAATGAGCCAGATGgaatctcttcttcttgatAAGAACCGAAAAATGGAACACGAACTAACACAGTTGAAGGTCAAACTTTCTGAAAAAACATCTTCACTCGAAACAGCTGAACAGAAGGTAGCAGAACTTTCAGCTAATGTTAATGAACAACAAAAACTGATACAAAAGTTGGAAGATGATATATCCAAGGGATATAGTTCCAGTTCCAAAGATCATAAAGGAACTTTCCTGGATGACTGGGATCTATCAGAGGCTAACCGGAGTGAGGTGAATGAGCATCAAAATATGGATCAAAGGCATGCCTTAGATCAAGATCAGAGCTCAATGCTTAAAGTAATATGTAGTCAGAGAGATCGATTTAGGACCCGCTTGAGAGAGACAGAAGAGGAAATAAGGCAGTTGAAGGAGAAGATTGGAGTATTAACTGCAGAACTGGAAAAGAGCAAAGCAGATAATGTCAAACTATACGGGAAGATTCGTTACGTCCAAGACTATAATGTTGAgaaagtggtttccaggggttCTAAAAAGTATGCAGAAGATCTTGAAAGTGGTTTCACATCAGATGTTGAATCTAAATACAAGAAGATATACGAGGAAGATATAAATCCTTTTGCTGCATTCTCAAAAAAGGAAAGAGATCAAAGATACAAGGAGTTGGGATTTAGAGACAGAATCACACTCAGCAGTGGACGATTTCTTCTTGGTAACAAGTATGCCCGAACTTTTGCATTCTTCTATACAATCGGGTTGCATGTCTTGGTCTTTACCTGTCTCTACCGAATGTCAGCTTTGAGTTATCTTAGTCATGGCTCAGATGAAACACTGGTTGGAGAGAGAACCATTGATCTTCCGCGTGGTCTGTAA 1641 0.3888 MLYTDFKKASPEDKSSLFNALLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALASVAEQDLKMSELESENRKMKVELEEFRTEATHLKNQQATIRRLEERSRQLEQQMEEKVKEIVEIKHRNLAEENQKTLEILKEREQLLQDQLQSAKESVSNMKKLHELAQNQLFELRAQSEEERAAKQAEANLLMDEVERAQTMLLGLEREKGVLRSQLQTANEDSENKKSILLIHIPILGYNSIEAEDWEAATSGEEMSQMESLLLDKNRKMEHELTQLKVKLSEKTSSLETAEQKVAELSANVNEQQKLIQKLEDDISKGYSSSSKDHKGTFLDDWDLSEANRSEVNEHQNMDQRHALDQDQSSMLKVICSQRDRFRTRLRETEEEIRQLKEKIGVLTAELEKSKADNVKLYGKIRYVQDYNVEKVVSRGSKKYAEDLESGFTSDVESKYKKIYEEDINPFAAFSKKERDQRYKELGFRDRITLSSGRFLLGNKYARTFAFFYTIGLHVLVFTCLYRMSALSYLSHGSDETLVGERTIDLPRGL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00177 546 PANTHER HOMEOBOX PROTEIN CUT 241 528 - -
Tsu02g00177 546 Coils Coil 177 225 - -
Tsu02g00177 546 PANTHER CCAAT DISPLACEMENT PROTEIN-RELATED 241 528 - -
Tsu02g00177 546 Coils Coil 375 409 - -
Tsu02g00177 546 PANTHER HOMEOBOX PROTEIN CUT 5 229 - -
Tsu02g00177 546 Coils Coil 22 42 - -
Tsu02g00177 546 Coils Coil 277 318 - -
Tsu02g00177 546 Coils Coil 63 128 - -
Tsu02g00177 546 Coils Coil 131 172 - -
Tsu02g00177 546 PANTHER CCAAT DISPLACEMENT PROTEIN-RELATED 5 229 - -
Tsu02g00177 546 Pfam CASP C terminal 293 523 IPR012955 GO:0006891|GO:0030173
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00177 Tsu-Chr2 1414088 1423315 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00177 K09313 - tcc:18604076 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00177 02 1414088 1423315 Tsu02g00177 02 1414088 1423315 ECH