LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu02g00018	ATGCCGATACGAAGAAGAAGATTAGTAAAATTAGCCGATGTTGGTACATGTGTTGGTACTTCCGTTGACATCATAGCAGTAGTTAATGATGTTGGCCTCCCCAAGACCACTAGGGGCACTGATTTGTGCTGTACCATAAGACTCATTGATCAAACTAAATATCAATCTGGAACGTCTATCAACATTTTTATCCAAACTCCACAAGCTTTCCCCCGTTTTGCGTCTGCTGGAGATATAATTCTGCTCTGTAATGTTAAGATCTGTCTTTTGCCGGATGACAACGAAATCAATGCTACTGTCTACAGAGCTTTTTCCTACTTTGCCTTATTCAAAGGGAGGGATGCTGTTGCTTTTGCCCCTTATCAAACATATTCATTTGATAACTCAACAGTTACTCTCACTGATGTTGACAGAAAATGCATACTCGATCTTAGAGATTGGTTGACCAATTTTCAGATTCCTCAAGCTTCAGGTGATTTTCCTATGTTAAGAGAAATCAAAGAAGGTCACTTAAATTTGGCATGCAAGATACTTCATTGCTGCAAGGCTGCAAATCAATGGTTTGTTTATGTGTGGGATGGTACAGACACCCCACCAAATGTCATAAATGCAATGCCAAATGATGAAATTAATTCTCCAATTCCATTAGAGTTGGAACCGTCTTTGCCAAATGATGAAATTAATTCTCCAATTCCTACTGCTGGATCTATATTGAGGATTAGGTTTGAACTATCTGTTGAGACAAATCATCACCCAATTCTTAACATTGGTGAATGGGTCAAGTTTGTCTATTTAAGTCTCAAAGTTGATTCAGCATCAGGACTATGGCATGGCGATTTTACCCCACAATCAAAGATTCGATATACACCATCTGATGATTGTCTTATTACAGAGCGTCAAAGGTTCTATCATGATCGGATGTTGTTGAAATCAGGAAACAATTTTATTGGCATGATTCCTCAGTCTATCAGCTTATCCGAGGTTCTTCATATTATTACAATTTATATTACAGGGGTTCATCCCGATCACAATCATAGGGGTCATTGTACTTTAAGGCATGTACTCAATCATTTGAAGGTGCCGCAAATATTCAAGTGTGTTGTTCGAGTAGTAGCAGTCCAGCCATCTCAAGTTGAAAATTTCTATTCTCCTACCGAAAAATATCTGATGAGACTAACTCTAGAGGATCCAACAACAAGAATTAAAGTTTTTGTATATGATAAAGATGGGGAAACTCTTTTTCATGGTTATCCTAgcattgaaaatttgaaaagaaaactaAACATATTACTTGGAATAACTGAGTGTGAAGACAATGACGTAACGAATACCCCAAGAAATCCCCCATGGGTGAGTGTATGTATTAACTCATATAAGTCCCAAAATAATCAACGGATATTTGTCCTATCTGACACTGAAATAGCAGATAACCCTTAA	1437	0.3709	MPIRRRRLVKLADVGTCVGTSVDIIAVVNDVGLPKTTRGTDLCCTIRLIDQTKYQSGTSINIFIQTPQAFPRFASAGDIILLCNVKICLLPDDNEINATVYRAFSYFALFKGRDAVAFAPYQTYSFDNSTVTLTDVDRKCILDLRDWLTNFQIPQASGDFPMLREIKEGHLNLACKILHCCKAANQWFVYVWDGTDTPPNVINAMPNDEINSPIPLELEPSLPNDEINSPIPTAGSILRIRFELSVETNHHPILNIGEWVKFVYLSLKVDSASGLWHGDFTPQSKIRYTPSDDCLITERQRFYHDRMLLKSGNNFIGMIPQSISLSEVLHIITIYITGVHPDHNHRGHCTLRHVLNHLKVPQIFKCVVRVVAVQPSQVENFYSPTEKYLMRLTLEDPTTRIKVFVYDKDGETLFHGYPSIENLKRKLNILLGITECEDNDVTNTPRNPPWVSVCINSYKSQNNQRIFVLSDTEIADNP	478

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu02g00018	478	SUPERFAMILY	Nucleic acid-binding proteins	171	291	IPR012340	-
	Tsu02g00018	478	SUPERFAMILY	Nucleic acid-binding proteins	8	150	IPR012340	-
	Tsu02g00018	478	Pfam	Telomeric single stranded DNA binding POT1/CDC13	19	148	IPR011564	GO:0000723\|GO:0000781\|GO:0003677
	Tsu02g00018	478	Gene3D	-	8	156	IPR012340	-
	Tsu02g00018	478	PANTHER	PROTECTION OF TELOMERES 1	8	473	IPR028389	GO:0000723\|GO:0043047
	Tsu02g00018	478	SMART	Telo_bind_a_2	8	149	IPR011564	GO:0000723\|GO:0000781\|GO:0003677

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu02g00018	-		-	gmx:100800003	360.533

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu02g00018	02	121327	124386	Tsu02g00018	02	121327	124386	ECH