Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04996 ATGGGTACAATGTTTCCTGAAAATGGTGGCTATGTTGTTTGGGTTTCATCTGCATTAGGCCCATTTTGGGGTTTTCAACTTGGTTGGATGAAATGGCTTAGTGGTGTAATTGACAATGCTTTATACCCAGTTTTGTTTCTAGATTATCTTAAATCAGCTATTCTTGTTATATTCTTGCAGGAGAAGTTAATAATCCTGGTAAGACACTTCCAAAAGCACTTTTTTATGCTGTTGTTTTGGGGTATTTTTTTACCTCTTTTGGTTGGAACTGGTGCTATTGAAGTTAATAGAGAGTTATGGTGTGATGGTTACTTTTCAGAAGTTAGTAGAGTTATAGGAGGTGTTTGGTTAAGAACATGGGTTCAAGTTGCATCTGCTTTATCAAATATGGGAATGTTTGTAACTGAGATGAGTAGTGATTCTTTTCAGCTTTTGGGAATGGCTGAAAGAGGTATGCTTCCTGAATTCTTTGCTAAAAGATCACGTTACGGAACGCCTTTTATCAGTATTTTGTTCTCAGCTTCTGGTGTGATTTTGCTTTCTTGGTTGAGTTTTCAAGAAATTGTTGCTGCTGAAAATTTCTTGTACTGTTTTGGTATGCTTATGGAGTTTGTTGCATTTGTTAAGTTGAGGAAGAAATTTCTTTTCAGAAGAAATTGGTTATGTGACTATGGTTTGGCACCAACATTGCTTATATTTGTGGTTTTGGCTTTTGCTTCTTTTAAGGTATTTGTCATAAGTATCTCAGCTGTTATAATGGGACTTGTATTGCAGCCTTGTTTGAAATATATGGAGAGAAAAAGATGGTTAAGGTTTTCTGTTAATCCTGATCTTCCAGATATTTATGCTGCTTAA 855 0.3544 MGTMFPENGGYVVWVSSALGPFWGFQLGWMKWLSGVIDNALYPVLFLDYLKSAILVIFLQEKLIILVRHFQKHFFMLLFWGIFLPLLVGTGAIEVNRELWCDGYFSEVSRVIGGVWLRTWVQVASALSNMGMFVTEMSSDSFQLLGMAERGMLPEFFAKRSRYGTPFISILFSASGVILLSWLSFQEIVAAENFLYCFGMLMEFVAFVKLRKKFLFRRNWLCDYGLAPTLLIFVVLAFASFKVFVISISAVIMGLVLQPCLKYMERKRWLRFSVNPDLPDIYAA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04996 284 PANTHER ACID PERMEASE FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 57 - -
Tsu01g04996 284 PANTHER ACID PERMEASE FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 75 283 - -
Tsu01g04996 284 Pfam Amino acid permease 111 246 IPR002293 GO:0016020|GO:0022857|GO:0055085
Tsu01g04996 284 PANTHER POLYAMINE TRANSPORTER PUT1 1 57 IPR044566 GO:0022857
Tsu01g04996 284 PANTHER POLYAMINE TRANSPORTER PUT1 75 283 IPR044566 GO:0022857
Tsu01g04996 284 Gene3D Amino acid/polyamine transporter I 74 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04996 Tsu-Chr1 56741211 56742065 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04996 1 54 Organic Solute Cotransporters AT1G31830 92.593 1.69e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04996 - - gmx:100806830 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04996 01 56741211 56742065 Tsu01g04996 01 56741211 56742065 ECH