Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04995 ATGAGCAACCAAAAAACACTTCtagaattttttgaaaaagaaaagcctCTTGTACCATCTTCACCTACTTCAGGAAATGAAGAAATTCTCTCTACTGTTTCATATTGCACCTTTGTTTTCACCTTCACTGACCCTTCAGAATCTCCTGCACAAAGAGACTCTAAGAGACTTCAACTTTCAAGGCTCATAGCTATGTTGAAATCTTCCAAAAAACCAGTTCATGAAAAAGTTGTAGGACCTTTAGTATCAATGATCAAAGCCAATCTTTTTAGGCCACTCCCTCCACCTACAAACCCTTCTGCTATATCAGAATTTCTTGATGAAGAAGATCCTATTTCAATATTTTCACCTTTATGGTCACATCTACAAATAGTTTATGAAATTCTACTTAGGCTTGTTAATAGCACAGACTTCAAAATACTTAGAAACTATATGGACCATTCTTTCCTCCTTAATCTGTTATCGCTTTTCCAATCCGAAGATCCGAGGGAACGTGAAAGCTTGAAAAATGTGTACCACAAGATATATTCTAAGTTTGTTTGCGACCGTTCTGCGATGAGGAAATCGATGACTGATGTTTTATTGAACTATGTTTTTGAGACTGAGAAACATTCTGGTATTGCTGACTTGCTTGAGATATGGGGAACTATTGTTAATGGATTTACCGTGCCGCTCAAGGAAGAGCACAAGTTGTTTCTTATGAGAGTTTTGATTCCTTTACATAAGACTAAAGGGATGCAAGTTTATCATAGACAACTTGCTTATTGTATTTCACAGTTTGTGCAGAAGGAGCCTATGCTTGGAGGTGTTGTTGTAAGGGGAATTTTGAGATATTGGCCTGTTACAAATTGTCAAAAGGAAATTTTGCTGATTGGTGAATTGGAAGATCTCGTCGAGAATTTGGATCCTGATCAATATCGTAAGTTGGCCTTGCCGATATGTACTCAGATTACAAAATGCATCAACAGTTGGAATTCTCAGGTAGCTGAAAGGGCGCTATATGTATGGAACAATGAGCAGTTCTACAAAATGGCAACAACAGGAACAGTAGAAGTACTTCCAGTGATAGTAGAAGGTGTggaaaagaatttgaagttgcaTTGGAGCAAGAGTGTTAGGCAGCTAACAGAAAGTGTGAAGGTGGTGGTGGAAGATATTGATCCAGATTTATATGCAAAAGCTCAAATGGATATGAAAGTTAAAGAATCAGAAGCACATCAAAAAGatataaagagaaaaaagacTTGGGAAAGAATTGAATTGGCAGCTTCTAAGAATCAGTTTGTGAATCCACAAAGATTCATATGTGTCTCCAACTGA 1320 0.3583 MSNQKTLLEFFEKEKPLVPSSPTSGNEEILSTVSYCTFVFTFTDPSESPAQRDSKRLQLSRLIAMLKSSKKPVHEKVVGPLVSMIKANLFRPLPPPTNPSAISEFLDEEDPISIFSPLWSHLQIVYEILLRLVNSTDFKILRNYMDHSFLLNLLSLFQSEDPRERESLKNVYHKIYSKFVCDRSAMRKSMTDVLLNYVFETEKHSGIADLLEIWGTIVNGFTVPLKEEHKLFLMRVLIPLHKTKGMQVYHRQLAYCISQFVQKEPMLGGVVVRGILRYWPVTNCQKEILLIGELEDLVENLDPDQYRKLALPICTQITKCINSWNSQVAERALYVWNNEQFYKMATTGTVEVLPVIVEGVEKNLKLHWSKSVRQLTESVKVVVEDIDPDLYAKAQMDMKVKESEAHQKDIKRKKTWERIELAASKNQFVNPQRFICVSN 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04995 439 PIRSF PP2A_B56 9 437 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tsu01g04995 439 Gene3D - 22 421 IPR011989 -
Tsu01g04995 439 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 20 423 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tsu01g04995 439 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 18 424 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tsu01g04995 439 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 18 424 - -
Tsu01g04995 439 SUPERFAMILY ARM repeat 28 408 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04995 Tsu-Chr1 56736239 56738274 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04995 K11584 - gmx:100802007 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04995 01 56736239 56738274 Tsu01g04995 01 56736239 56738274 ECH