Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04986 ATGGGTTGTGTTGCTTCAAAActagaggaagaagaagaagttgtaGCTATCTGTAGAGAGAGAAAACGTCAACTGAAGTTAGCTGTAGAGAAAAGATATGCACTTGCTGAAGCTCATTGTAAGTATTTTCACTCTTTGAATGCAGTAGCTGCAGCTATTAAGCTCTTTGTTGCAAGACATTCTTCACCTTCTTCACCTTTTCTAATAACTTTTCCTCCCAAGGGTTTTGACCCTTCTCCTTCTCATTCTGAAAATGTCATAAATAACCCTATGTTCCTTCAGCAAACACCATCTGAGACTAAACATGAATCTATTGCTGTTAGTGATTCATGCATTGTTTCAACAACATCTTCAGAGTCTTCTGAGGATGAGGGAGAGGGTGAAGAAGGTTGTAGAGAAGAGCAGAATGAACAACAGGCAAGTGAGTATTTCTacatgaatatgaatatgaatatgaacaTGCCTATGCATATGTCTATGCCACCACCTGCAATGCCATCTCCACAGAGAGATTTTGGTTGGGATTTCTTTTACCCTTTTGATAGTATGAGGCAAGAGGTTATGAGTGGCTACCATAGGAACTCAGATGATGATTTGAGGGCAGTGAGGGAGGAAGAAGGGATTCCTGAGTTAGAGGATGAAATGGAAAGGGGAGAGATTGAGCATAAGGTGGCTGTGAGTGTTGAGGAGAAGAGTAATAATGAATGTGGAGGACAAGTTGTGAATAATGGTGTTGAAGCCGCGAAGGCGGTGGATGTGGTTAAGGAAAATGTTGGGGAGCAAAAGGGGCTTGCTGTTTTTGATACACCTGCAGAAGGGAGAGAGTTGCTTGAAGCTTTGAAAGATATTGAGGATCATTTCATTAGGGCTTATGAGTCTGGTAAGAACGTGACAAAGATGCTTGAGGCTAATAGAATTCCTCTTCATTCTAGTTTAGAGGAAATCAAAGAAAGCTCAACCAAACTCATCAATGCAATAACATGGAAGTCCATGTCATCTAGGCAATCATCATGCAAGAGTTTGGTGGTTCAAAATATGAAAGATTCTTCAAAATGGGTGGAATATAAGAATGATCTGTTTGATGATTATGGAGGGATGGATTCAGGAAGCCATTTATTAACATTAGGAAGGTTATATGCATGGGAAAAGAAACTGTTTGAGGAGGTTAAGGCTGGAGATAGCACACGGAAAAATTACGATAAGAAATGTGCGCAATTGAGAAATAAGAATGTTAAAGGAGATGATGAATTAAGCATGGACACGACTAGAGCTGATATGAAGGATCTATATGCTGGGATCTTGGTTGCAATTCGACGTGCAGAATCAATCTCAAAGAGAATTCAGAAAATGAGAGATGAAGAATTACAACCTCAAATTGTTGAACTACTGAAAGGCCTTACACAATCATGGAAAATCATGTTGGAATCGCATGAAACACAAAAGAAGATTCTTTCTGAAGTCAAATACTTCACATGTCCCGCAGATGGAAAATTTTGCAATCAATCTCGTGGATTGGCAACTCTTCAGCTTGAAGCTGAGCTTCACCATTGGCGCATGTGTTTTAGAGAGTATACTGCAGCTCAAAAGGCATATGTAGAAGCTCTTTATGGATGGTTAAATAAGTTCATAGTCCCTGAAGTTGAATTTTACTCGAGAAGCAAAAATGTTGGCATGCCAATGCCATTTCAAGTTAACGGGCCGCCGTTACTTGTGATATGCAACGATTGGTTAAGTTCTATGCGAAAGTTGCCTGATAAGACGGTAGCACTTGCATTGAAAAGTGTTGTGAAAGATGTGAAAGCTCTTTGGATTCAACAGTGTAAGGAGCAGCAGCAGAAGAGGAAAGTAGAGAGCTTAACAAAAGATTTAGATAGAAAATATCTAGGATCATATAAACTAAAGACAAAGATGCTTGAGTTGCAAGTAACAGATCATAGATCAGAAGAGGAAACTGAAGAAGAATGCATGATGGAGAAAGGTGATGATTATTTGGAGACACTGAGGAGAAAACTTGAGGCAGAGAAGGAAAAGCATTACGGTTGCATTCAAGAAACACAGAGGATGACATTGAATGGATTGCAATATGGATTTTCCCAAGTACTTGAATCTTTGACAGAGTTTTCAAAAGCATCACAGAAAATGTACAATGATCTTGTGACTTTCAGTGAAAATAGCGAGAAAGCCGGGAACATTTCGTATATAGAAGGTGGTTGCAATGCGGAAAACTGTAACAGCGAAAATGGACAATAG 2250 0.3862 MGCVASKLEEEEEVVAICRERKRQLKLAVEKRYALAEAHCKYFHSLNAVAAAIKLFVARHSSPSSPFLITFPPKGFDPSPSHSENVINNPMFLQQTPSETKHESIAVSDSCIVSTTSSESSEDEGEGEEGCREEQNEQQASEYFYMNMNMNMNMPMHMSMPPPAMPSPQRDFGWDFFYPFDSMRQEVMSGYHRNSDDDLRAVREEEGIPELEDEMERGEIEHKVAVSVEEKSNNECGGQVVNNGVEAAKAVDVVKENVGEQKGLAVFDTPAEGRELLEALKDIEDHFIRAYESGKNVTKMLEANRIPLHSSLEEIKESSTKLINAITWKSMSSRQSSCKSLVVQNMKDSSKWVEYKNDLFDDYGGMDSGSHLLTLGRLYAWEKKLFEEVKAGDSTRKNYDKKCAQLRNKNVKGDDELSMDTTRADMKDLYAGILVAIRRAESISKRIQKMRDEELQPQIVELLKGLTQSWKIMLESHETQKKILSEVKYFTCPADGKFCNQSRGLATLQLEAELHHWRMCFREYTAAQKAYVEALYGWLNKFIVPEVEFYSRSKNVGMPMPFQVNGPPLLVICNDWLSSMRKLPDKTVALALKSVVKDVKALWIQQCKEQQQKRKVESLTKDLDRKYLGSYKLKTKMLELQVTDHRSEEETEEECMMEKGDDYLETLRRKLEAEKEKHYGCIQETQRMTLNGLQYGFSQVLESLTEFSKASQKMYNDLVTFSENSEKAGNISYIEGGCNAENCNSENGQ 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04986 749 Coils Coil 8 28 - -
Tsu01g04986 749 Pfam Protein of unknown function (DUF632) 276 600 IPR006867 -
Tsu01g04986 749 PANTHER OS09G0542500 PROTEIN 1 730 - -
Tsu01g04986 749 PANTHER UNCHARACTERIZED 1 730 - -
Tsu01g04986 749 MobiDBLite consensus disorder prediction 112 136 - -
Tsu01g04986 749 Pfam Protein of unknown function (DUF630) 1 60 IPR006868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04986 Tsu-Chr1 56678207 56681673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04986 1 623 Acyl Lipid Metabolism Gene Families AT2G27090 28.393 3.60e-57 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04986 - - gmx:100807897 1086.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04986 01 56678207 56681673 Tsu01g04986 01 56678207 56681673 ECH