Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04983 ATGGCGTTTTGGCATCGAATCGAAAAATCCAAGCTCAAAACAGCATACTTTCAATTTCGTAGATGTTACACTCTTCTTCCTCATGCTTCTTTCTTGAATTCTACCCCTAAAACTCGTCCTATGTTGATGCCAAATCCTCATTCGCTTTTCTACGACAAACCCACCAATTTTGTTAATAGTGTCAGGTTTTATGCTGTTCCTGTTAAGTTCCAGGTAAAGCCCAAGAAGGAGGAGGATGATGGGCCAAGGTTGAATGATCAGGTCAAAGCTGAATATGTCAGGCTAGTAGGGGATGATGGACACTCAGTGGTGTCAAGGTTTGAAGCACTGGAACGTGCCAAGACTCTTAAACTTGATTTAGTTGAGGTTGATAAAAATGCTAATCCACCTGTTTGTAAAATCATGAACTACCACAAGGAAATGtacaagaagaaagaaagtgaCAAGGAGCGTGCTAAAAGCAAGTCTGAGATGACAATGCGAAAGGAAACTAAGGAAGTACGAATTTCTGAAAAAACTGAATCAAAAGACCTTAAGATGAAATCAGACCATATTATAAAGTTAATGGAGAAAGGTTATCGGGTGAAGGCCAAGGCAACAGGCAAGGCAGATCAGTCCATGTTCGACGCAATATCTCGTCTTTCGGCTCTGATAGAAGATGTTTGTGTTGTGGAAAGTGGACCATATTTGGCAAAAAAAGAAGCTTATATCATAGTAAGACATGTTAAATATGGACCACCTAAGACAGGTGGGAAAAAATCAACAGATGCCGCACAATCGGATGCAAAGGCCGGGGAGGGTGATGTGGAACCATTAACTACCAATACTAGTAATTCTATTGAATATGAGAATCAAAGTTCTCCTGAATATCGGATTGATCCAGAATCCCCACCCGTGCTAGAAAATAGGTATAAAAAACCCAATCATCGTGGCGAGAACAAGGTTCAATCCAATGCGCAAGTGCCTCCTCCTGTGGTCGAGAATAGGTACATAAAAGCTGAGCCAAGAAACAGGTTCCAACAACCAACACCGAATACAGGTCCAGGTCCAGTGCCAGGGTCAAGAGATTCAAACAGGTGGGCACCCCCAAATTCGAATCAGCCAAGACATGTCCCAGTATCGAATACAGGTCCAGGTCCAGTGCCAGGGACAAGAGATGCAAACAGGTGGGCACCCTCAAATTCGAATCAACCAAGACATGCACCAGTAAATATTAACTTTAATCCGAAAACTGATAGTCCTCCTGGTACAAGAAACTCAATGCCTTCCCGTGACGATATCAATAGGAATCCAATAGGTCCGAATACAACTCGAGGTCCGAATACAACAAGTCCAGGCTACGGCCTTTTTAGTAGGGATGCATAG 1365 0.4227 MAFWHRIEKSKLKTAYFQFRRCYTLLPHASFLNSTPKTRPMLMPNPHSLFYDKPTNFVNSVRFYAVPVKFQVKPKKEEDDGPRLNDQVKAEYVRLVGDDGHSVVSRFEALERAKTLKLDLVEVDKNANPPVCKIMNYHKEMYKKKESDKERAKSKSEMTMRKETKEVRISEKTESKDLKMKSDHIIKLMEKGYRVKAKATGKADQSMFDAISRLSALIEDVCVVESGPYLAKKEAYIIVRHVKYGPPKTGGKKSTDAAQSDAKAGEGDVEPLTTNTSNSIEYENQSSPEYRIDPESPPVLENRYKKPNHRGENKVQSNAQVPPPVVENRYIKAEPRNRFQQPTPNTGPGPVPGSRDSNRWAPPNSNQPRHVPVSNTGPGPVPGTRDANRWAPSNSNQPRHAPVNINFNPKTDSPPGTRNSMPSRDDINRNPIGPNTTRGPNTTSPGYGLFSRDA 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04983 454 MobiDBLite consensus disorder prediction 244 454 - -
Tsu01g04983 454 MobiDBLite consensus disorder prediction 270 291 - -
Tsu01g04983 454 Pfam Translation initiation factor IF-3, N-terminal domain 84 150 IPR019814 GO:0003743|GO:0006413
Tsu01g04983 454 SUPERFAMILY Translation initiation factor IF3, C-terminal domain 163 242 IPR036788 GO:0006413
Tsu01g04983 454 PANTHER TRANSLATION INITIATION FACTOR IF-3 1 452 IPR001288 GO:0003743|GO:0006413
Tsu01g04983 454 MobiDBLite consensus disorder prediction 145 167 - -
Tsu01g04983 454 Gene3D - 75 151 IPR036787 GO:0003743|GO:0006413
Tsu01g04983 454 PANTHER TRANSLATION INITIATION FACTOR IF3-1, MITOCHONDRIAL 1 452 - -
Tsu01g04983 454 MobiDBLite consensus disorder prediction 388 448 - -
Tsu01g04983 454 Gene3D - 159 245 IPR036788 GO:0006413
Tsu01g04983 454 SUPERFAMILY Translation initiation factor IF3, N-terminal domain 81 153 IPR036787 GO:0003743|GO:0006413
Tsu01g04983 454 MobiDBLite consensus disorder prediction 296 312 - -
Tsu01g04983 454 MobiDBLite consensus disorder prediction 358 373 - -
Tsu01g04983 454 TIGRFAM infC: translation initiation factor IF-3 84 235 IPR001288 GO:0003743|GO:0006413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04983 K02520 - gmx:100808433 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04983 01 56654869 56659428 Tsu01g04983 01 56654869 56659428 ECH