Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04979 ATGGGAGTCacaattttttccaaaaattgtACCTCCATGCTCTCTATTCTTATTTTGCTCTGTATTTTTCTCTTGAACTGTGTCATGGCTAGTGTTTATACTGTTGGTGATCAAGATGAATGGAGTAGCCAGACAAATTATGCTACATGGGCAGAGAAACACAACTTTAGCCTTGGAGATGTTCTTGTTTTCAAGTATGTGAAGGGGCAACATAATGTGTATGAAGTGAAAGAGGACACTTTTAGATCATGTGAAACAAGTAGTAGTGGAGTGTTGGCTAAGTATGAGAGTGGTGAAGATCAAGTTGTACTCAATAAGGTCAAGAAATATTGGTTCATTTGCAATATAGCTGGCCATTGCCTTGGAGGAATGAGGTTTGGAATTCAAGTTAAAAATGATAGCAacaaaaatgttactaattCCATGGATGGTGGTGAATTAAATCCACAAATTCAACCAAGTCCATTAGAAAATTCTTGTATCTCTCAAAGATGGAGAGTGATTGGGATTTTCACTCCTTTTGGAACAGGATTATTATTATCgttcaacttttatttttga 561 0.3387 MGVTIFSKNCTSMLSILILLCIFLLNCVMASVYTVGDQDEWSSQTNYATWAEKHNFSLGDVLVFKYVKGQHNVYEVKEDTFRSCETSSSGVLAKYESGEDQVVLNKVKKYWFICNIAGHCLGGMRFGIQVKNDSNKNVTNSMDGGELNPQIQPSPLENSCISQRWRVIGIFTPFGTGLLLSFNFYF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04979 186 Gene3D - 29 136 IPR008972 -
Tsu01g04979 186 Pfam Plastocyanin-like domain 41 124 IPR003245 GO:0009055
Tsu01g04979 186 PANTHER BLUE COPPER PROTEIN 10 141 IPR039391 GO:0009055
Tsu01g04979 186 SUPERFAMILY Cupredoxins 30 130 IPR008972 -
Tsu01g04979 186 PANTHER BLUE COPPER BINDING PROTEIN-LIKE 10 141 - -
Tsu01g04979 186 CDD Phytocyanin 32 130 - -
Tsu01g04979 186 ProSiteProfiles Phytocyanin domain profile. 31 132 IPR003245 GO:0009055
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04979 15 144 Miscellaneous Gene Families AT2G31050 41.221 1.44e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04979 - - gmx:100788784 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04979 01 56606753 56607710 Tsu01g04979 01 56606753 56607710 ECH