Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu01g04972 | ATGGAAATTGAAGGATCATCGAAGAAGATGATTGCAACACAAGAGGAGATGGTGGAAGCTAGGGTTCCATTGGCTTACAGAGATCAGTGTGCGCATTTACTCATTCCTCTCAACAAATGCAGACAAGCTGAATTCTATCTTCCATGGAAGTGCGAGAACGAACGTCATTCTTACGAAAAGTGCGAATACGAACTCGTTATGGAGAGAATGCTTCAGATGCAAAAGATCCGCGAAAATGATAAAGCTAATTCCAAACAACCCCTTACTCAGGGCGGTGCTGCCGGCGCTATTCCTCTCATTCCCAAACCCGCCAATGCTTGA | 321 | 0.4517 | MEIEGSSKKMIATQEEMVEARVPLAYRDQCAHLLIPLNKCRQAEFYLPWKCENERHSYEKCEYELVMERMLQMQKIRENDKANSKQPLTQGGAAGAIPLIPKPANA | 106 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu01g04972 | 106 | ProSiteProfiles | Coiled coil-helix-coiled coil-helix (CHCH) domain profile. | 27 | 69 | - | - | |
| Tsu01g04972 | 106 | Pfam | NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) | 11 | 73 | IPR008698 | GO:0005739 | |
| Tsu01g04972 | 106 | MobiDBLite | consensus disorder prediction | 78 | 106 | - | - | |
| Tsu01g04972 | 106 | PANTHER | BNAC09G20920D PROTEIN | 1 | 106 | - | - | |
| Tsu01g04972 | 106 | PANTHER | NADH:UBIQUINONE OXIDOREDUCTASE B18-LIKE SUBUNIT | 1 | 106 | IPR008698 | GO:0005739 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu01g04972 | K03963 | - | egr:104432990 | 179.104 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tsu01g04972 | 01 | 56566454 | 56569699 | Tsu01g04972 | 01 | 56566454 | 56569699 | ECH |