Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04911 ATGCAGCAACCACAGAAGAAATTGGCAGCAATAGGTTCATTCCGACATAGTTTTCTAGAAAAGAGCAAAGAGAGACTCCTtgctaaaaataatatttctcaATACCACCCTTATGATTTCGATCCAAACCAACAACCACCTAGACGCGGCGGTTTCAATCTCGACGCCATTTCTGATCATGTCGTCAGCCTTCGCAATGCCTTCGCTGATTTCATCGTTAAATTATACGAGATGGGTCGCAATGATCGACGTAAAGTTGTTTTCGCCATGAAAGCTGGTTTATCTTTGGCTCTTGTTTCTCTTTTCATTTATATTAAGGAAGAACAGCTTAGTAAATACTCTATTTGGGCTATTCTcactgttgttgttgtttttgaattCAGCATAGTAGGTGCCACCCTTAACAAAGGGTTCAATCGTGCTTTGGGAACAATTTCAGCTGGACTTATTGCTTTGGTCATTGCAAGATTATCTGTTTTTGTTGGTGGAGCTTTTGAGGAACTTATTATTGTCATTGCTATTTTTTTTGCAGGGTTTTGTGCAAATTATGTGAAGTTGTATCCTGCAATGAAGCCTTATGAATATGGATTTCGCGTATTCTTGTTAACGTTTTGCATTGTGTTGGTATCTGGGAGACACGGAATGAAGTTTATAACCACTGCTTTTTATAGATTGGTTCTTATTGGTGTTGGTGCTGGTGTGTGTTTGTCTGTCAATATTTGCATTTTCCCCATTTGGTCTGGTGAGGATCTCCACAAATTGGTGGTCAAAAATTTCCATGGAGTTGCTGGATCTTTAGAAGGTTGTGTAAATGGATACCTACAATGTGTTGAATATGAGAGGATCCCATCTAAAATACTTGTATACCAAGCCTCTGATGACCCTCTTTACCGTGGTTATAGAGCGGCAATGCAATCTTCAAGCCAAGAGGAGACTTTGATAGATTTTGCACTATGGGAACCACctcatggtccatacaagatgtTCAATTATCCTTGGAAAAGCTATGTGAAACTTAGTGGAGCATTGAGGCATTGTGCTTCATTGGTCATGGCAATGCATGGATGCATACTTTCAGAAATACAGGCACCCCCGGAAAAGAGGTTGGTATTCTTTCAAGAACTTCAGAAGGTTGGTGCCGAAGGAGCTAAAGTATTGCGTCAACTAGGAAGCAAAGTCGAAAAGATGGAGAAGCTAAGCAGAAGTGACATTCTGTTAGAAGTTCATGATGCAGCTGAGCTATTACAGATGAAGATTGATAGCCATTCATTCCTTCTAGTCAATTCAGAGAATTGGGAAGCTGTAAGGCAACACCAGTCTagacaaaatgaaaaatctgaaaatttgattgatgaaaataataagCAGTCAGTGACCAATGAATCGGGGGAGGATTCAAAGCTTAGTATAAGCATACAACATTCGGTGGCAGAGTCGAGTTTCATGCAGAACACAAACAAGAGCTTAGTATCATGGCCTCTCTCTTTTTGCAATGATGCTATAATAAATGAGGCAGAATCTAAAGTTTATGAAAGTGCTAGCTCATTGTCTTTGGCTACATTTGCTTCGCTTTTAATCGAGTTTGTTGCAAGACTTCAAAATCTTGTGGATGAATTCCAAGATCTTAGTGAGAAGGCTAATTTTAAAGATCCATTTGATCAACCTATAGTAAATTAA 1677 0.3733 MQQPQKKLAAIGSFRHSFLEKSKERLLAKNNISQYHPYDFDPNQQPPRRGGFNLDAISDHVVSLRNAFADFIVKLYEMGRNDRRKVVFAMKAGLSLALVSLFIYIKEEQLSKYSIWAILTVVVVFEFSIVGATLNKGFNRALGTISAGLIALVIARLSVFVGGAFEELIIVIAIFFAGFCANYVKLYPAMKPYEYGFRVFLLTFCIVLVSGRHGMKFITTAFYRLVLIGVGAGVCLSVNICIFPIWSGEDLHKLVVKNFHGVAGSLEGCVNGYLQCVEYERIPSKILVYQASDDPLYRGYRAAMQSSSQEETLIDFALWEPPHGPYKMFNYPWKSYVKLSGALRHCASLVMAMHGCILSEIQAPPEKRLVFFQELQKVGAEGAKVLRQLGSKVEKMEKLSRSDILLEVHDAAELLQMKIDSHSFLLVNSENWEAVRQHQSRQNEKSENLIDENNKQSVTNESGEDSKLSISIQHSVAESSFMQNTNKSLVSWPLSFCNDAIINEAESKVYESASSLSLATFASLLIEFVARLQNLVDEFQDLSEKANFKDPFDQPIVN 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04911 558 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 12 555 - -
Tsu01g04911 558 Pfam Aluminium activated malate transporter 77 543 IPR020966 GO:0015743
Tsu01g04911 558 Coils Coil 525 545 - -
Tsu01g04911 558 MobiDBLite consensus disorder prediction 438 465 - -
Tsu01g04911 558 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 4-RELATED 12 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04911 Tsu-Chr1 56108762 56111270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04911 20 550 Miscellaneous Gene Families AT1G25480 60.432 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04911 - - gmx:100776371 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04911 01 56108762 56111270 Tsu01g04911 01 56108762 56111270 ECH