Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04882 atgaAGCCTACTTCAAATTTGCATGGTCTTAATTATGAGCAACAAAAGAAGATAATCCTCAATGGTCCTCGTCCTTCCCCTTTGATGATTCACAAGCCTAATTCATCTCGTAAACCACAAAGGGTAGTTCCCATAATCATTTACACTCAATCGCCAAAGATTATTCACACAAAAGCAAAAGATTTCATGGCTCTTGTTCAAAGACTCACAGGCATGTCTCCTACCAATCAAGTGTTGCCACGTCAGCATGAAGTATctgaaaataattttgattcttCTTTGTCAGATGGATCAAACAATATTGGTGATGAAACAACTTCAACAACTAGCTCAATTGTTAAGAGggaaaatattaatattaatgagAGTTGTGAGAAGGGGGGTGTAACTAGTAATGTTGATGACCAACAACATAGTCCTTCTAATAATATGATGAATTTTGCTGATATGCCATTATTCACACCAACTTCATATGATTTCTTTTGCTCTAATTCATCTAAACCAGtttatcaattttctgattcTCCATATGGAATTTTGGGAAGTTTGATATCTCCTTCTGGATTGGGATTCATTCAAGATCTACCTGAATATTAA 597 0.3283 MKPTSNLHGLNYEQQKKIILNGPRPSPLMIHKPNSSRKPQRVVPIIIYTQSPKIIHTKAKDFMALVQRLTGMSPTNQVLPRQHEVSENNFDSSLSDGSNNIGDETTSTTSSIVKRENININESCEKGGVTSNVDDQQHSPSNNMMNFADMPLFTPTSYDFFCSNSSKPVYQFSDSPYGILGSLISPSGLGFIQDLPEY 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04882 198 PANTHER VQ MOTIF-CONTAINING PROTEIN 8, CHLOROPLASTIC 20 198 IPR039833 -
Tsu01g04882 198 Pfam VQ motif 51 75 IPR008889 -
Tsu01g04882 198 MobiDBLite consensus disorder prediction 88 110 - -
Tsu01g04882 198 PANTHER F16F4.1 PROTEIN-RELATED 20 198 IPR039607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04882 Tsu-Chr1 55802362 55802958 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04882 - - gmx:102663683 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04882 01 55802362 55802958 Tsu01g04882 01 55802362 55802958 ECH