Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04818 ATGGGATTGGGAACCATCACTGTTCCTATGAATATCCTTCCTCAATTCGGGTTGCTCCGAACCCACTTAACTCCTATTCGGGTCAACAACTCTTCCGGGTTCAGCTTCCCTCCCTCTCCAAGAAGAAATCAGAGTTTTGGTAAATTCGTTTGCTTAGCCGTTGATGATGACCTCAGACAGAATCAACAACAGTTGAGTACTACTTCATCTAGACTTGGTTCCGCCATTGAAGATAGACCCGGTGAAGAAGCATTGGAAAATTTTAACGAAGATGGGGAAAGAAGTCCTATCTATGATTTTCTTTATCCTGATAAAGAGCTTCTTCCTGATGATAAGGAAATGAGTCTATTTGATCATCTTGAAGAGCTGCGACAGAGAATCTTTGTATCAGTTCTGGGAGTTGGAGGAAGCATTTTGGGATGCTTTGCCTTTTCAAAAGATTTGGTAAGGCTTCTCGAAGCTCCTGTTCAATCAGAGGGTGTCAGATTTCTTCAGCTAGCTCCTGGTGAATTTTTCTTCACCACTTTAAAGGTGTCTGGATACTGTGGCCTCCTCTTGGGAAGTCCCATCATTCTCTATGAAATCATAGCCTTTATAATTCCTGGTCTAACGAAAGCTGAAAGAAGGTTTCTAGGGCCAATTGTTTTAGGCTCATCAGTACTTTTCTATGCCGGAATAACCTTCTCCTACTTAGTTCTGGTACCCGCGGCATTAAATTTCTTTGTCAATTACGCTGAAGGTGCTGTTGAATCATTGTGGTCCATTGATCAATACTTTGAGTTTGTTCTGGTTCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTACCTATTATACAACTTCTATTGGGACAACTTGGATTGGTGTCTGGAGACCGGATGCTATCAGTTTGGAGGTACGTTGTAGTCGGTGCAGTAGTGGCAGCTGCTATAGTTACGCCATCGACAGATCCTCTCACTCAAGTTCTTCTAGCAGCACCCCTATTAGGTCTTTACCTAGGTGGTGCATGGATGGTTAAACTTTCTGGACGATAA 1032 0.4283 MGLGTITVPMNILPQFGLLRTHLTPIRVNNSSGFSFPPSPRRNQSFGKFVCLAVDDDLRQNQQQLSTTSSRLGSAIEDRPGEEALENFNEDGERSPIYDFLYPDKELLPDDKEMSLFDHLEELRQRIFVSVLGVGGSILGCFAFSKDLVRLLEAPVQSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFIIPGLTKAERRFLGPIVLGSSVLFYAGITFSYLVLVPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPIIQLLLGQLGLVSGDRMLSVWRYVVVGAVVAAAIVTPSTDPLTQVLLAAPLLGLYLGGAWMVKLSGR 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04818 343 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC, CHLOROPLASTIC-LIKE 42 343 - -
Tsu01g04818 343 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC 42 343 IPR002033 GO:0016021
Tsu01g04818 343 Pfam Sec-independent protein translocase protein (TatC) 118 326 IPR002033 GO:0016021
Tsu01g04818 343 ProSitePatterns TatC family signature. 258 277 IPR019820 -
Tsu01g04818 343 PRINTS Bacterial Sec-independent translocation TatC protein family signature 115 142 IPR002033 GO:0016021
Tsu01g04818 343 PRINTS Bacterial Sec-independent translocation TatC protein family signature 189 207 IPR002033 GO:0016021
Tsu01g04818 343 PRINTS Bacterial Sec-independent translocation TatC protein family signature 207 233 IPR002033 GO:0016021
Tsu01g04818 343 PRINTS Bacterial Sec-independent translocation TatC protein family signature 258 286 IPR002033 GO:0016021
Tsu01g04818 343 Hamap Sec-independent protein translocase protein TatC [tatC]. 111 343 IPR002033 GO:0016021
Tsu01g04818 343 TIGRFAM tatC: twin arginine-targeting protein translocase TatC 116 331 IPR002033 GO:0016021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04818 K03118 - gmx:100788116 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04818 01 55167662 55171633 Tsu01g04818 01 55167662 55171633 ECH