Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04751 ATGGTAGAACCGAATCGCATTTCCGTTCATCACGTTCTCGGCGCTGGCTTAGTTGCTGATGTGCTGTTATGGAAGAATTGGCGCGGCGGAGTTGCGGTGCTGAGTTCTGCAACCACATTGTGGTATCTGTTTGAACGAGCCGGTTACAATTTCTTGTCGTTTGTGGCAAATGTGATATTGCTTCTCGTCGTGATTCTGTTTCTTTGGGCTAAAGCTGCTAATCTTCTTAATAGACCTCTTCCTCCTCTTCCTGATCTGGAGATCTCGGAGGAAACTATTGCAAAGCATGCTGAGGTGCTGCAAATTTGGGTAAATCGGGCTTTGGCTATTGCACATGATATAGCAATTGAGAAGAATTTGTTTCTTTGTCTACAGGTTGTTGGTGTATTGTTGGCAATATCTTTTATTGGTAGTCTGTTTAACTTCTTGACTTTGATCTATATATGTGTTCTTCTTAGCTTGTCTCTTCCTGTGTTGTATGACAAGTACCAGGATCGAATTGATGAGAAGATTCATGTGATACACGGGGTTATTCACCCACATTATCAAAAGATTTACAACATTGTCTTGAGCATTATTCCAAAACGTACAACCAAAGAAAAGAAGGTGCAATAG 615 0.413 MVEPNRISVHHVLGAGLVADVLLWKNWRGGVAVLSSATTLWYLFERAGYNFLSFVANVILLLVVILFLWAKAANLLNRPLPPLPDLEISEETIAKHAEVLQIWVNRALAIAHDIAIEKNLFLCLQVVGVLLAISFIGSLFNFLTLIYICVLLSLSLPVLYDKYQDRIDEKIHVIHGVIHPHYQKIYNIVLSIIPKRTTKEKKVQ 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04751 204 ProSiteProfiles Reticulon domain profile. 18 204 IPR003388 -
Tsu01g04751 204 PANTHER RETICULON-LIKE PROTEIN B11 5 203 - -
Tsu01g04751 204 Pfam Reticulon 18 171 IPR003388 -
Tsu01g04751 204 PANTHER RETICULON 5 203 IPR045064 GO:0009617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04751 Tsu-Chr1 54695929 54698998 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04751 K20723 - gmx:100527029 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04751 01 54695929 54698998 Tsu01g04751 01 54695929 54698998 ECH