Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04735 ATGGAAGATGGAAAATGGGTTCTGGTGCGCGGCTCTGCACAGAAGGACTTGTGGAAACCAAGTTTACCAAATGCTGATGATGAACCTTCAAGGCCCTTGAAGGTTGCCTTTTCTGAGCCTGCAGAGTACTGGACTGATGCCATCCCCATCGGAAATGGTCGTCTTGGAGCCATGATTTGGGGTGGTGTACAATCAGAAGTTCTACAGCTCAATGagGACACACTTTGGACTGGAATACCTGGCAACTACACCGATAAAAATGCTCCTGAAGCTCTGGCTGTAGTCCGAAAACTTGTTGATGACAGAAAATATTCAGATGCTTCAATAGCAGCTAAGAAATTGACCGGAGGTCCTACTGATGTATACCAACCTCTTGGTGATATTAAATTAGAATTTGATGATTCTCATCTTCAATATTCGGAAGAGTCTTATCACAGGGAGCTTGATTTGGATATTGCAacagcaaaaataaaatacaatgtgGGTGATGCAGAATTTACCAGAGAGCATTTTGCTTCTAATCCGGACCAAGTGCTAGTGACAAAGTTTTCCACAAGCAAGTCGGGGTCATTATCGTTTACAGTATCTTTGGAGAGCCAATTAGATCACAATTCACGGGTAAGCGGCCTAAATCAGATAATAATGGAAGGAAGCTGTCGTGGCAAAAGGCCGCCGGAAGTGAATTCAATTGACAAACCAAAAGGAATTCAGTTTTCTGCAGTTCTTGATATACAAATTAGTAATGAAAAAGGGGTTATACATGTTTTGGATGATAAGAAGCTTAGAGTTGAAGGTTCAGATTGGGCTATTTTGCTTCTGACAGCTTCCTCATCTTTTGACGGTCCATTTACTAAGCCTGAAAACTCCAAGAAAGATCCTTCTTCCGAGTCCTTGAGTAAAATGAAGTCTGCCAAAAGTTTTTCATATGATGATATTTACGCACGCCACTTGGATGACTATCAGAATCTATTTCATCGGGTCTCATTGCAACTCTCTAAAAGTTCCAAGACTGTTTTAGGAAAACCTATTTTGGACGAAGGGAAATCGGTTTCCTGTCAAACTAACATCTCTCAAATTGGAGATGATAATATTGTTCCAACTTCATCAAGAATCAAATCATTTCAAAATGATGAAGATCCTTCCTTTGTGGAGCTTTTGTTTCAATATGGTCGATATCTCCTAATTGCTTGTTCACGTCCTGGAACTCAGGTGGCAAACCTACAGGGAATATGGAACAGAGATGTTACGCCTGCATGGGATTGTGCTCCGCACTTGAACATAAATCTTCAAATGAACTATTGGCCGTCCCTTTCATGCAACCTACATGAGTGTCAAGAGCCACTATTTGATCACATTTCCTCTTTGTCTGTCAATGGTAGTAAAACTGCAaagGTGAATTATGAAGCAAATGGTTGGGTTACACATCATGTTGCTGACTTATGGGCTAAATCATCCCCATATGAAGAAGATCCTGTTTGGGCTGTATGGCCAATGGGTGGAGCTTGGCTTTGTACCCATCTATGGGAGCATTACACTTATACAATGGACAAGgaatttcttaaaaataaagcATATCCTTTGTTGGAAGGATGTACGTCATTTTTGTTGGATTGGTTGATCGAAGGCTCTGGTGGATTTTTGGAAACTAACCCATCAACTTCACCAGAGCACATGTTCATTGCACCGGATCAAAAGCAAGCTAGTGTGAGCTACTCATCAACCATGGACATTTCAATCATAAAAGAAGTTTTCTCTATAATCATTTCTGCATCTGAGGTTTTGGGAAGACATGATGATGCTATTATTAAAAGAGTAACCGAATCTCAGTCTAAGCTTCCTCCTATAAAAATTGCTAGGGAAGGGTACATTATGGAATGGGCTGAAGATTTCCAGGACCCAGAAACACATCATCGACATGTTTCGCATCTGTTTGGCTTGTTTCCGGGGCATACAATAAGTCTTGAGAGAAATTCAGATCTCTGTAAAGCTGTGGGTTATAGTCTAATGAAAAGAGGAGAAAACGGTCCTGGGTGGTCAACAACTTGGAAAGCTGCATTATGGGCTCATCTTCACAACAGCAAGCATGCATATCGCATGATAAAACACTTGATTATCCTGATAGACCCTGCTAAGAGGAAAGTAGATTTTGAAGGAGGACTTTACAGTAACCTATTCACAGCACATCCTCCTTTCCAGATTGATGCAAACTTTGGTTTTTCAGCAGCAATTGCAGAGATGCTTGTTCAAAGCACAACCAAGGACCTCTACTTACTTCCTGCGTTGCCTCGGGATAAATGGGCAAATGGTTGTGTGAAAGGATTAAAAGCGCGTGGCGGGGTGACGGTCAACATCTGCTGGAAAGAAGGTGATCTGCATGAAGTTGGCCTTTGGTCACAAAATCAGAATTCCAGCATGAGACTACATTATAAAGGGAACACAGTCGTGGCAAATTTATCACCAGGAAAAGTTTACTCGTATAATAATTGGTTGAAGTGTGTCAAGACATACTCCCTTAGCGAAGTCAATCCCTAA 2532 0.4072 MEDGKWVLVRGSAQKDLWKPSLPNADDEPSRPLKVAFSEPAEYWTDAIPIGNGRLGAMIWGGVQSEVLQLNEDTLWTGIPGNYTDKNAPEALAVVRKLVDDRKYSDASIAAKKLTGGPTDVYQPLGDIKLEFDDSHLQYSEESYHRELDLDIATAKIKYNVGDAEFTREHFASNPDQVLVTKFSTSKSGSLSFTVSLESQLDHNSRVSGLNQIIMEGSCRGKRPPEVNSIDKPKGIQFSAVLDIQISNEKGVIHVLDDKKLRVEGSDWAILLLTASSSFDGPFTKPENSKKDPSSESLSKMKSAKSFSYDDIYARHLDDYQNLFHRVSLQLSKSSKTVLGKPILDEGKSVSCQTNISQIGDDNIVPTSSRIKSFQNDEDPSFVELLFQYGRYLLIACSRPGTQVANLQGIWNRDVTPAWDCAPHLNINLQMNYWPSLSCNLHECQEPLFDHISSLSVNGSKTAKVNYEANGWVTHHVADLWAKSSPYEEDPVWAVWPMGGAWLCTHLWEHYTYTMDKEFLKNKAYPLLEGCTSFLLDWLIEGSGGFLETNPSTSPEHMFIAPDQKQASVSYSSTMDISIIKEVFSIIISASEVLGRHDDAIIKRVTESQSKLPPIKIAREGYIMEWAEDFQDPETHHRHVSHLFGLFPGHTISLERNSDLCKAVGYSLMKRGENGPGWSTTWKAALWAHLHNSKHAYRMIKHLIILIDPAKRKVDFEGGLYSNLFTAHPPFQIDANFGFSAAIAEMLVQSTTKDLYLLPALPRDKWANGCVKGLKARGGVTVNICWKEGDLHEVGLWSQNQNSSMRLHYKGNTVVANLSPGKVYSYNNWLKCVKTYSLSEVNP 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04735 843 PANTHER ALPHA-L-FUCOSIDASE 2 1 841 - -
Tsu01g04735 843 SUPERFAMILY Six-hairpin glycosidases 292 795 IPR008928 GO:0005975
Tsu01g04735 843 PIRSF UCP007663 7 839 IPR016518 GO:0004560
Tsu01g04735 843 Gene3D - 270 747 IPR012341 GO:0005975
Tsu01g04735 843 Pfam Glycosyl hydrolase family 65, N-terminal domain 37 281 IPR027414 -
Tsu01g04735 843 PANTHER - 1 841 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04735 Tsu-Chr1 54569416 54574667 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04735 K15923 - gmx:100810387 1392.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04735 01 54569416 54574667 Tsu01g04735 01 54569416 54574667 ECH