Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04712 ATGGCACCTTTGATAATGATTCCCCTCTCTCTCTTATTTCTCCTTCTTCTCCAATTTCCCTTCCAAACCATTTCAACCAACTCTGAAGGGAATGCTCTTAATGCTTTGAAGAGTAGACTTTCTGACCCCAACAACGTTCTTCAGAGCTGGGACCCAACTTTGGTTAATCCATGTACTTGGTTTCATGTTACATGTGACATCAACAACCATGTCACTCGTTTAGACTTGGGAAATGCTAATGTTTCTGGAATATTGGGATCAGAACTTGGCCACCTACACCATCTGCAATATCTGGAGTTGTATGGGAATGACTTAAGAGGGAAGATTCCTAAGGAACTTGGAAACTTGAAAGCACTTATTAGCATGGATTTGTATGATAACAAGTTGGAGGGGAAAATTCCAAAGACATTTGGCAAGTTGAAATCATTAAAATTCTTGCGGCTAAACAACAACAAGTTGACAGGATCTATCCCACGAGAACTCACTCGTCTCAAAAATCTCAAAATCTTTGATGTTTCTAACAATGAACTTTGTGGAACAATACCGGTAGATGGCAACTTTGGATCCTTTCCGGTGAAGAGTTTTGAAAACAACAGACTAAGTGGTCCAGAGCTGAAAGGACTTGTTCCGTACGATTTTGGATGCTGA 648 0.4028 MAPLIMIPLSLLFLLLLQFPFQTISTNSEGNALNALKSRLSDPNNVLQSWDPTLVNPCTWFHVTCDINNHVTRLDLGNANVSGILGSELGHLHHLQYLELYGNDLRGKIPKELGNLKALISMDLYDNKLEGKIPKTFGKLKSLKFLRLNNNKLTGSIPRELTRLKNLKIFDVSNNELCGTIPVDGNFGSFPVKSFENNRLSGPELKGLVPYDFGC 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04712 215 Gene3D Ribonuclease Inhibitor 25 207 IPR032675 -
Tsu01g04712 215 Pfam Leucine rich repeat 121 177 IPR001611 GO:0005515
Tsu01g04712 215 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 2-LIKE 11 197 - -
Tsu01g04712 215 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 11 197 - -
Tsu01g04712 215 SUPERFAMILY L domain-like 27 203 - -
Tsu01g04712 215 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04712 Tsu-Chr1 54415401 54418148 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04712 4 203 Receptor kinase-like Gene Family AT1G71830 56.716 1.73e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04712 - - gmx:100816279 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04712 01 54415401 54418148 Tsu01g04712 01 54415401 54418148 ECH