Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04711 ATGAGCAGTGCTTTATTGAAGAACCGTTCTAAGGTTGTTTCTGATTTCATGATGTTGCAGAAACAATTAATGTTCACTAACAATTCCTCCATTAATCAAATCAAACTTCACTCTCTTCTTTCTAACAAACACCATTCTAAACCTTACTTTCGATTACCACATTTCTTCACCAAAAATACAACCACAcaatatcaaatttcttcatcgttttgttcttcttcttcatcttcttcaactgCTTCTGTTTCTAAGGTTGGTTTTGTTGGTTGGTATTTGGGGATGATCAAGTCACACCCTATTTTTACTAAAAGTGTTACTTCTGCACTCATTTATACCGCTGCTGATTTATCCTCTCAGACTATTGAGCGGCAATCATCTTCAAaatcttttgattttataaGGACTTTACGCATGGCGGGATATGGGTTGATCATTTTAGGACCAACACTGCATTACTGGTTCAATTTTGTGTCAAAGCTTTACCCAGGGAGGGATCTTTTCTCTACATTGAAGAAAATGGTCATGGGCCAGTCAATTTATGGACCTACCATGACTGTTATTTTCTTCTCCTTGAATGCAGCTTTGCAAGGTGAAAACAGCAAAGAGATTGTTGCACGTTTAAAGCGTGATCTTGTTCCTACGCTGTTAAATGGAGTCATGTATTGGCCTATATGtgattttattacttttagATTCATCCCAGTTCATTTACAGCCATTAGTCAGCAATTCGTTTTCGTACCTGTGGACCATTTATATGACCTATATGGCGAGCCTAGAGAAAGCCAAGACAGATAGCTGA 801 0.3471 MSSALLKNRSKVVSDFMMLQKQLMFTNNSSINQIKLHSLLSNKHHSKPYFRLPHFFTKNTTTQYQISSSFCSSSSSSSTASVSKVGFVGWYLGMIKSHPIFTKSVTSALIYTAADLSSQTIERQSSSKSFDFIRTLRMAGYGLIILGPTLHYWFNFVSKLYPGRDLFSTLKKMVMGQSIYGPTMTVIFFSLNAALQGENSKEIVARLKRDLVPTLLNGVMYWPICDFITFRFIPVHLQPLVSNSFSYLWTIYMTYMASLEKAKTDS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04711 266 Pfam Mpv17 / PMP22 family 194 253 IPR007248 GO:0016021
Tsu01g04711 266 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 1 264 IPR007248 GO:0016021
Tsu01g04711 266 PANTHER OS12G0508100 PROTEIN 1 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04711 Tsu-Chr1 54409657 54413734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04711 45 261 Miscellaneous Gene Families AT2G14860 67.281 2.53e-104 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04711 K13348 - gmx:100816797 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04711 01 54409657 54413734 Tsu01g04711 01 54409657 54413734 ECH