Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04710 ATGACGATACCGAAACGAAACTATACTCGAATAAATGCTTTGGAGCTGAAAGCTCTAATTATTCGGAAGGTTGGTCGTCAGCGAGCTGGCAAGTACTTTGATCAGCTTGGAAAATTGGTTAGTTCAAAGATCAGCAAGACTGAGTTTAACAAGATTTGCATCATGACAATTGGGAAAGAAAATATCCCTCTTCACAATCAACTCATCAAGGCAATTCTCAACAATGTTTGTCTGGCTAAAGTCCCACCTCTTAGAGCCTCTGCAAAAATAGGGAGTTTGAAAGCTAAAGATCCAAATCAGCAGCAGAGAAAATCAATGCAAATGCGGTATGGGGACGCGTTTCCTCCTTCCCTGCGGAAGGGTGGTTCTTTGGCTACCCGTGAAGGGATGCTTGCTGGTTGTCAAAATGCTTTGGGACAATTAGGGAAGCCCCGAAACCTTGCATCTAAGGATTTTATCTATAAGACTCCAGAGCAGCAGAGTGCAACAGAACTGAATTCACTTGGCAGCAGACCTCCTATTTCCGTTGAAGATGGAGAAGAGGTTGAACAGATTGCTGGAAGCCCAAGCATTCAAAGTAGGAGCCCACCAGTTACAGCTCCCCTTGGGATAACCATGAATTTCGGTCATGGACGTAGCCCCCTTTCTAATGCATCATCACGGAGAAAGTATCCTCCAGAGACCTGTTATAACAATGGATACCTCCCTGATACATCGTCGCTGAGGAGTCGTTTGGAGCAAAAGTTGGAGAAGGAGGGTTTAACTGCGACAGTTGATTGTGTCAATCTATTGAATAATGCGCTGGATTCTTATATGAAGAGGTTGATTGAATCCTCTATGGGTTTATCTGGGCCTAGAATCGGAAATGAACACCGAAGACAACAAAATGGACAGTCTCTAGCTGATTCGAATATGCTGCAACCAAGAAGATATATGCAAACAGCAGTGCAATCTTCTAGGGCATCTCTCTTGGATTTTCGTGTTGCAATGGAATTGAGTCCACAGTCTCTTGGACCAGATTGGCCCACACAGCTTGAGAAGATTTGTATACGTGCTTCTGAAGATTGA 1068 0.4401 MTIPKRNYTRINALELKALIIRKVGRQRAGKYFDQLGKLVSSKISKTEFNKICIMTIGKENIPLHNQLIKAILNNVCLAKVPPLRASAKIGSLKAKDPNQQQRKSMQMRYGDAFPPSLRKGGSLATREGMLAGCQNALGQLGKPRNLASKDFIYKTPEQQSATELNSLGSRPPISVEDGEEVEQIAGSPSIQSRSPPVTAPLGITMNFGHGRSPLSNASSRRKYPPETCYNNGYLPDTSSLRSRLEQKLEKEGLTATVDCVNLLNNALDSYMKRLIESSMGLSGPRIGNEHRRQQNGQSLADSNMLQPRRYMQTAVQSSRASLLDFRVAMELSPQSLGPDWPTQLEKICIRASED 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04710 355 MobiDBLite consensus disorder prediction 285 307 - -
Tsu01g04710 355 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 8 281 IPR024738 GO:0070461
Tsu01g04710 355 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 5 354 - -
Tsu01g04710 355 MobiDBLite consensus disorder prediction 289 307 - -
Tsu01g04710 355 PANTHER TRANSCRIPTIONAL ADAPTER 1 5 354 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04710 Tsu-Chr1 54405320 54407255 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04710 - - gmx:100817344 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04710 01 54405320 54407255 Tsu01g04710 01 54405320 54407255 ECH