Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04705 ATGAAGTTTATGAAACTTGGTTCCAAGCCAGATACCTTTCAGACTGATGCGAACAACAATGTTAGGTATGTGGCAGGTGATTTGGCATCAGATATCGTTGTTAGCATAGGGGATATGAAGTTTTACTTGCACAAGTTTCCTCTCATATCGAAGAGTTCTCACTTACAGAAGTTGATCTCCCTCAATAACGAAGAAAACAtaaatgaaattcaaatttccGACATTCCTGGTGGTGCAAGTGCCTTTGAGATATGTGCTAAGTTTTGCTATGGCATGACTGTTACGCTTAATGCTTACAATGTGATTGCCACTAGATGTGCAGCAGAGTATCTTGGAATGCACGAAGCCATCGAGAAAGGAAACCTTCTTTACAAGATCGATGTTTTCCTTAGTTCTAGCATTTTCCGTAGTTGGAAGGATTCAATCATCATTCTTCAGACTACAAAGTCTATGTTGCCCTTGGATGAGGAGCAAAAGGTGGTTACTCGTTGCATTGAATCTATAGCAAACAAGGCGTGTGTCGATGTGTCCAAAGTTGATTGGTCTTACACGTATAACAGAAAAAAGCTTCCGGAGGAAAACGGGATTGAGTCGAACCAGAATGGAGTCAGAACTCGAAATGTGCCAAAAGACTGGTGGGTTGAAGATTTATGTGAGCTTGAAGTTGACATGTATGAATCTGTGATTAAAAATATCATAACCAAGGAAATTCAAACTAATGATGTAATTGGTGAAGCGTTGAAAGCTTATGCTTACAGAAAGTTGCCAAATTTCAGCAAGGGTATGATCCCATGTGGGGATGTGTCGAAGCATCGGTTAATAGTTGAAACTATTGTGAAGTTGTTGCCTTCTGAGAAAGGCAGCGTTTCGTGTCGCTTCTTAGTCAAGTTATTGAAAGCTGCAATTTTTGTAGAATCAGAAGATAGGATTAAAGAAGAGTTAGTAAAGAGAATTGGCCAGCAACTGGAGGAGGCTTCGgtaaatgatattttgattcgAGCACCAGATGGTGAGATTACAATGTATGATGTCGGTATAGTACAAAACATTGTAAGGGAGTTTCTTATGAAAGATCATAATTCTGAGATTGAATCGGTTGATGGTGGTGAACTTGAGGGGATAAGAAAGCCAGGAATTTTATCAGATGCTTCTAAGCTGATGGTTGCAAAACTCATAGATAGTTACCTTGCTGAAATCGCAAAGGATCCTAATTTACCATTGTCGGATTTCGTTAATCTTGCTGAGTTGGTCTCTAACATCTCTCGTCCTGCTCACGATGGCATTTACAGGGCTATTGACACATATTTGAAGGAGCACCCTGGGATTAACAAAGGCGAAAAGAAGCGAATATGCAAGTTGATGGATTGCAGAAAACTATCAGTTGATGCATGTTTGCATGCAATACAAAACGAGAGGCTGCCATCACGTGTAGTTGTGCAGGTACTATATTTCGAGCAAGTTAGAACCGCCGCATCATCAGGTACTAGCACTCCAGACATAATAACTAAAGGAATCAAAGATTTGAGCATTGGATCAAACTGTAGCTCAAGGTCCGGGACAACTAATCCAGAAGACGACACAGACGGTTCAGCAACAGCCGAGGAACTAAAGGCATTAAGAAAGGAGCTTGCATCGTTGAGACTAAGCAATGGAGTTGGAAATAGTTTCAAAGACGGAGATGCTAAACCAAGCATGGATAAGGCTGTTATTGGGAAGATGAAAGGGTTGTTGAAGTCAAAGAAGTCTTTCATTAAGCTATGGGCAAGCAAAGGAGGACATGGTGAAAATAGTGGTTCGGATTCATCTGAGAGTATTGGTTCTGCTAACCCTGAAGAAGTTAAATCTACACCATCAAGAAATAGAAGGCATTCAGTTTCCTAA 1881 0.3993 MKFMKLGSKPDTFQTDANNNVRYVAGDLASDIVVSIGDMKFYLHKFPLISKSSHLQKLISLNNEENINEIQISDIPGGASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHEAIEKGNLLYKIDVFLSSSIFRSWKDSIIILQTTKSMLPLDEEQKVVTRCIESIANKACVDVSKVDWSYTYNRKKLPEENGIESNQNGVRTRNVPKDWWVEDLCELEVDMYESVIKNIITKEIQTNDVIGEALKAYAYRKLPNFSKGMIPCGDVSKHRLIVETIVKLLPSEKGSVSCRFLVKLLKAAIFVESEDRIKEELVKRIGQQLEEASVNDILIRAPDGEITMYDVGIVQNIVREFLMKDHNSEIESVDGGELEGIRKPGILSDASKLMVAKLIDSYLAEIAKDPNLPLSDFVNLAELVSNISRPAHDGIYRAIDTYLKEHPGINKGEKKRICKLMDCRKLSVDACLHAIQNERLPSRVVVQVLYFEQVRTAASSGTSTPDIITKGIKDLSIGSNCSSRSGTTNPEDDTDGSATAEELKALRKELASLRLSNGVGNSFKDGDAKPSMDKAVIGKMKGLLKSKKSFIKLWASKGGHGENSGSDSSESIGSANPEEVKSTPSRNRRHSVS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04705 626 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
Tsu01g04705 626 PANTHER OS12G0117600 PROTEIN 1 623 IPR043454 -
Tsu01g04705 626 MobiDBLite consensus disorder prediction 589 626 - -
Tsu01g04705 626 Pfam NPH3 family 211 464 IPR027356 -
Tsu01g04705 626 MobiDBLite consensus disorder prediction 594 614 - -
Tsu01g04705 626 Pfam BTB/POZ domain 29 119 IPR000210 GO:0005515
Tsu01g04705 626 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY2 1 623 IPR029960 GO:0009958
Tsu01g04705 626 SMART BTB_4 30 128 IPR000210 GO:0005515
Tsu01g04705 626 SUPERFAMILY POZ domain 22 118 IPR011333 -
Tsu01g04705 626 Gene3D Potassium Channel Kv1.1; Chain A 15 122 IPR011333 -
Tsu01g04705 626 ProSiteProfiles BTB domain profile. 30 98 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04705 Tsu-Chr1 54370881 54375779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04705 8 494 EF-hand Containing Proteins AT3G44820 34.674 4.90e-98 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04705 - - gmx:100818944 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04705 01 54370881 54375779 Tsu01g04705 01 54370881 54375779 ECH