Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04695 ATGAAAAATCAACTTTTGTTCTtatgcattttattttcatttttgataCTTCAAATTACTAGTCAAAAACATGCATGTGACAAAGGTTCTCCTAAAACTAGCAACTTTCCATTTTGCAACACTTCCTTATCTTATGAAACAAGAGCCAAGGACTTAGTGTCACGCTTGACACTTCAAGAAAAATCACAACAATTAGTAAACCCTTCAACCGGCATTTCAAGGCTCGGTGTACCTGCTTACGAATGGTGGTCAGAGGCACTTCATGGTGTCTCTAATGTAGGACCGGGTACACGTTTCGACAAAAGGGTACCCGGTGCTACTAGCTTTCCTGCAGTGATACTATCAGCTGCTAGTTTTAATGAAACATTATGGTACAAGATGGGACAAGTTGTGTCAAATGAAGCTAGAGCTATGTACAATGTTGATTTGGCTGGTTTGACATTTTGGAGTCCTAATGTGAATGTTTTTCGCGATCCGAGGTGGGGGCGTGGTCAGGAAACTCCAGGCGAAGATCCATTGGTCGTGTCTAGATATGCTGTGAATTATGTTCGTGGACTACAAGAAGTTGATGATGAAGCTAGTGTTAAAGGTGATAGGCTTAAGGTTTCAAGCTGTTGTAAGCATTATACTGCTTATGATCTTGATAATTGGAAAGGCGTTGATCGGTTCCATTTTGATGCAAAGGTGACAAAGCAAGACTTGGAGGATACTTATCAGCCTCCATTTAAGAGCTGTGTGTTGGAGGGGCATGTAAGTAGTGTCATGTGCTCATATAATAGGGTGAATGGAATTCCTACATGTGCTGATCCAGACCTTCTCCAAGGAGTAGTCAGAGGCCAATGGGGTCTAGATGGATATATTGTTTCAGACTGTGATTCAGTAGAAGTTTATTACAATGCAATTCAGTACACAAAAACTCCTGAAGATGCAGTGGCTCTTGCACTAAAAGCAGGTTTAAACATGAACTGTGGTGACTTTCTAAAAAAATACACTGCAAATGCTGTAAACTTGAAGAAAGTAGATGTATCTATTGTAGACCAAGCCTTGGTGTACAACTACATAGTCCTAATGAGACTTGGCTTCTTTGATAACCCAAAATCACTTCCATTTGCAAACCTTGGACCATCTGATGTATGCACAAAAGAAAATCAGCAATTGGCTCTAGAAGCTGCAAAACAAGGAATAGTTTTGCTTGAAAACAACAAAGGAGCTCTTCCTTTATCAAAAACCAAGATAAAAAACTTGGCTGTGATTGGACCAAATGCAAATGCCACAACAGTTATGATTAGCAATTATGCTGGCATACCGTGCCGCTACTCAAGCCCTTTACAAGGACTACAAAATTACATTTCTTCGGTAACTTACGCGCGCGGTTGCAGTGATGTTAAATGCGGTAACCAGAACCTTTTTGCAGCCGCAGTTAAGGCTGCAGCCTCTGCTGATGCAGTGGTTTTGGTTGTTGGATTAGACCAATCTATAGAAGCAGAAGGGTTGGATAGAGTGAACTTGACATTGCCTGGATTTCAAGAGAAACTTGTGAAAGATGTGGCTACTGCTACCAAAGGAACATTGATTTTAGTCATAATGGCTGCTGGTCCAATTGACACTTCTTTCACTAAAAGTGTCAGGAACATAGGAGGGATATTGTGGGTAGGTTATCCTGGTCAAGATGGTGGAAATGCCATAGCACAAGTAATATTTGGAGACTATAACCCAGGTGGTAGGTCTCCATTTACATGGTATCCACAATCTTATGTTGATCAAGTTCCAATGACAGACATGAACATGAGAGCCAACAGCAGTGGAAACTTTCCTGGAAGAACATATAGGTTTTACAATGGGAAATCACTCTATGAATTTGGTTATGGATTAAGCTACTCTACATTCTCAACCCATATAGCATCTGCTCCTTCCACCATCATGATCCAGAACAACATTTCAATTTCTAAACCACTTGATATCTTCCTTGATGATCAAGCTATTGATATTTCCACAATAAGTAGTTGCTTAAATTTGACATTTTCTCTTGTGATTGGTGTGAAGAACAATGGACCTTTTGATGGATCTCATGTGGTGTTAGTTTTTTGGAAGCCACCAAGTTCAGAGGTGATCAGTGGTGTTCCAATCAAACAATTGATAGGATTCGAAAGAGTACATGTTAAGGTTAAGATGACAGAGTTTGTGACAGTGAAAATTGATATATGCAAATTGCTAAGCAATGTTGATAGTGATGGTAAAAGAAAATTGGTTATTGGAAAGCACACTATTTTGATCGGATCTTCAAGTGAAAAACAAGTTAGACACAATATTGATATTACAAATGGTGGACAAGAATTTATGTCTGAATGA 2349 0.3912 MKNQLLFLCILFSFLILQITSQKHACDKGSPKTSNFPFCNTSLSYETRAKDLVSRLTLQEKSQQLVNPSTGISRLGVPAYEWWSEALHGVSNVGPGTRFDKRVPGATSFPAVILSAASFNETLWYKMGQVVSNEARAMYNVDLAGLTFWSPNVNVFRDPRWGRGQETPGEDPLVVSRYAVNYVRGLQEVDDEASVKGDRLKVSSCCKHYTAYDLDNWKGVDRFHFDAKVTKQDLEDTYQPPFKSCVLEGHVSSVMCSYNRVNGIPTCADPDLLQGVVRGQWGLDGYIVSDCDSVEVYYNAIQYTKTPEDAVALALKAGLNMNCGDFLKKYTANAVNLKKVDVSIVDQALVYNYIVLMRLGFFDNPKSLPFANLGPSDVCTKENQQLALEAAKQGIVLLENNKGALPLSKTKIKNLAVIGPNANATTVMISNYAGIPCRYSSPLQGLQNYISSVTYARGCSDVKCGNQNLFAAAVKAAASADAVVLVVGLDQSIEAEGLDRVNLTLPGFQEKLVKDVATATKGTLILVIMAAGPIDTSFTKSVRNIGGILWVGYPGQDGGNAIAQVIFGDYNPGGRSPFTWYPQSYVDQVPMTDMNMRANSSGNFPGRTYRFYNGKSLYEFGYGLSYSTFSTHIASAPSTIMIQNNISISKPLDIFLDDQAIDISTISSCLNLTFSLVIGVKNNGPFDGSHVVLVFWKPPSSEVISGVPIKQLIGFERVHVKVKMTEFVTVKIDICKLLSNVDSDGKRKLVIGKHTILIGSSSEKQVRHNIDITNGGQEFMSE 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04695 782 SUPERFAMILY (Trans)glycosidases 36 394 IPR017853 -
Tsu01g04695 782 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 395 629 IPR036881 GO:0004553|GO:0005975
Tsu01g04695 782 Pfam Fibronectin type III-like domain 690 762 IPR026891 -
Tsu01g04695 782 PANTHER BETA-D-XYLOSIDASE 5-RELATED 6 770 - -
Tsu01g04695 782 Pfam Glycosyl hydrolase family 3 N terminal domain 102 323 IPR001764 GO:0004553|GO:0005975
Tsu01g04695 782 Gene3D Immunoglobulins 663 774 IPR013783 -
Tsu01g04695 782 Coils Coil 381 401 - -
Tsu01g04695 782 Pfam Glycosyl hydrolase family 3 C-terminal domain 395 626 IPR002772 GO:0004553|GO:0005975
Tsu01g04695 782 PANTHER SUGAR HYDROLASE-RELATED 6 770 IPR044993 GO:0009044|GO:0045493
Tsu01g04695 782 Gene3D - 380 628 IPR036881 GO:0004553|GO:0005975
Tsu01g04695 782 Gene3D - 48 369 IPR036962 GO:0004553|GO:0005975
Tsu01g04695 782 SMART Fn3_like_2 690 762 IPR026891 -
Tsu01g04695 782 PRINTS Glycosyl hydrolase family 3 signature 109 128 IPR001764 GO:0004553|GO:0005975
Tsu01g04695 782 PRINTS Glycosyl hydrolase family 3 signature 202 218 IPR001764 GO:0004553|GO:0005975
Tsu01g04695 782 PRINTS Glycosyl hydrolase family 3 signature 276 294 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04695 Tsu-Chr1 54272316 54275560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04695 10 776 Glycoside Hydrolase AT3G19620 69.537 0.0 1115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g04695 K15920 - gmx:100817869 1320.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04695 01 54272316 54275560 Tsu01g04695 01 54272316 54275560 ECH